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Q5YW98 (Q5YW98_NOCFA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:NFA_26960 EMBL BAD57543.1
OrganismNocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP] EMBL BAD57543.1
Taxonomic identifier247156 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia

Protein attributes

Sequence length362 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5YW98 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 14AA5F472AC4DD15

FASTA36236,902
        10         20         30         40         50         60 
MNPDLPQDPA DVPTEPVEHR APGATPRPAE APTVEITAES SGLPAGHDPA TRPVRRSGPR 

        70         80         90        100        110        120 
CPDCDAEVSG PRCPGCGADL DGKYVALPVP GAAADRFEAD LGAVCVVTDR GIAHARNEDA 

       130        140        150        160        170        180 
VAAAVLEGEH GPHTTVIVVC DGVSTSANPQ AASGTAVRAG VQACLAALRQ GATAPDAAQA 

       190        200        210        220        230        240 
GLAAAADAVR AIATDDLHAP SCTYVSAVVR GAGGGAVDVT VANVGDSRAY WLAAEPFRDD 

       250        260        270        280        290        300 
PGCMPSQRLT VDDSWAQALV DAGAMDEQAA MNDPRAHTLL RWLGADSDEN PWSENAVRTF 

       310        320        330        340        350        360 
RAVGPGRLLL CSDGLWNYRP EPDGLAALAA APDPMAAARD LADFAVRSGG NDNITIALAP 


VS 

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References

[1]"The complete genomic sequence of Nocardia farcinica IFM 10152."
Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M.
Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IFM 10152 EMBL BAD57543.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006618 Genomic DNA. Translation: BAD57543.1.
RefSeqYP_118907.1. NC_006361.1.

3D structure databases

ProteinModelPortalQ5YW98.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING247156.nfa26960.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD57543; BAD57543; NFA_26960.
GeneID3108607.
KEGGnfa:nfa26960.
PATRIC22735006. VBINocFar94200_2740.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMATTNEDAM.
OrthoDBEOG6VTK3F.

Enzyme and pathway databases

BioCycNFAR247156:GJ9T-2743-MONOMER.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5YW98_NOCFA
AccessionPrimary (citable) accession number: Q5YW98
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)