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Q5YUS9 (Q5YUS9_NOCFA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:NFA_32150 EMBL BAD58062.1
OrganismNocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP] EMBL BAD58062.1
Taxonomic identifier247156 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia

Protein attributes

Sequence length753 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q5YUS9 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 0398AA6B1535043D

FASTA75380,407
        10         20         30         40         50         60 
MSEALPGFLD DYTEALRRHL DSPTHDTLTE GYDLGRRALV EGISLLDLTE HHFRLAAEAE 

        70         80         90        100        110        120 
RAAADPRVAE TALEFLLQTL AALDIATRGY LDGTRRYEQQ RSRADDLAGR DAFRTALVES 

       130        140        150        160        170        180 
LQDGFFVADA TGAIIEVNSA FGALTGYGAA GLPYPLPHPW SLPDGPRYPD LGTEASRFVL 

       190        200        210        220        230        240 
PIRHRDGRRL WLAVSTSALV KPENNELVYV GTIRDVTAEH DAQARDQAAS RLATAVGAAT 

       250        260        270        280        290        300 
TVVEVLSVGL DELRGTVGAE AAVVMVWPTR NGAPEVYVSG EAGADAADDT TRRLLDRARR 

       310        320        330        340        350        360 
RPPRSLSAIP EQADSSEGIV APLGETGDAA LWLRFAAPRA ISSADWTLFS LLIGHLSVAV 

       370        380        390        400        410        420 
QRARNFDQAR ATSLTLQRAM LGPIELPPRF SVHYEPALPP LEIGGDWYDV VPLRDGTIGV 

       430        440        450        460        470        480 
VVGDCVGRGL SAAVVMGQLR TAGRALLLRG AGPAQLLAEL DTVAARIPGA MCTTACVAVL 

       490        500        510        520        530        540 
DPVRGIVRYS SAGHMPPILA EVGKPGRLLE GGRSVPLATF EMPRRPEATT ALAPGSTLVL 

       550        560        570        580        590        600 
FTDGLVEQRG VDIDEGFAKI CAVLADTGGR LPREVADAVL RELSPAAGYD DDVAMVVYRQ 

       610        620        630        640        650        660 
PPAPLHLRVP AEATRLSALR RTLQAWFSAA AVPHDLAADL VAAANEACSN SIEHAYRAAA 

       670        680        690        700        710        720 
DSGEVVDLAA RIELDPDGDT ERLVIEVVDT GTWQPRSPDP GYRGRGLDMM RALTEELDID 

       730        740        750 
HSGPGTRVRM SVTLPAIKSP VANPLRGTQR RSG 

« Hide

References

[1]"The complete genomic sequence of Nocardia farcinica IFM 10152."
Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M.
Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IFM 10152 EMBL BAD58062.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006618 Genomic DNA. Translation: BAD58062.1.
RefSeqYP_119426.1. NC_006361.1.

3D structure databases

ProteinModelPortalQ5YUS9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING247156.nfa32150.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD58062; BAD58062; NFA_32150.
GeneID3107483.
KEGGnfa:nfa32150.
PATRIC22736046. VBINocFar94200_3259.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAVHYEPAL.
OrthoDBEOG6P06V9.

Enzyme and pathway databases

BioCycNFAR247156:GJ9T-3264-MONOMER.

Family and domain databases

Gene3D1.10.1240.30. 1 hit.
InterProIPR003594. HATPase_ATP-bd.
IPR017944. KaiA/RbsU_helical_domain.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF13581. HATPase_c_2. 1 hit.
PF00989. PAS. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00387. HATPase_c. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
SSF55874. SSF55874. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 2 hits.
PROSITEPS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5YUS9_NOCFA
AccessionPrimary (citable) accession number: Q5YUS9
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: May 14, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)