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Q5YUK5 (Q5YUK5_NOCFA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:NFA_32890 EMBL BAD58136.1
OrganismNocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP] EMBL BAD58136.1
Taxonomic identifier247156 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia

Protein attributes

Sequence length415 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

signal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5YUK5 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 90B892E1B2BF7DBE

FASTA41544,208
        10         20         30         40         50         60 
MYATDDPEGC GQRPGESVEF SALLEDSAED LYENAPCGYL STLLDGTIAK INTTLLGWLG 

        70         80         90        100        110        120 
YTRDEVVGRR HFSDLLTVGG RLYHETHFAP LLRMQGDIRG IALELRTATG ERLPVLVTST 

       130        140        150        160        170        180 
VKTAADGRPL LIRTTVFDAR ERRAYEAELL RARRAAEAER ERLQRLNTIL QRTLLPSALE 

       190        200        210        220        230        240 
PVPGFEVAAH YHIASLDEVG GDFYDLFPLA DGGWGFFLGD VCGKGAAAAV ITSRIRYTLR 

       250        260        270        280        290        300 
AAAVHDPDPA AVLTDLNRVM IAAYQPGDPR FCTVVHGRLS REGDAVHVAL AAGGHPPALL 

       310        320        330        340        350        360 
LRADGTADFL PTPGGQLIGA LPDATIATRG VDLAPGDTLL LYSDGLTEAR TGAGGLYGED 

       370        380        390        400        410 
ALLDFARSIA PAGAREVITE LTTLLDSLGN GVTDDTALLA LHRSTAADGQ PATDT 

« Hide

References

[1]"The complete genomic sequence of Nocardia farcinica IFM 10152."
Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M.
Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IFM 10152 EMBL BAD58136.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006618 Genomic DNA. Translation: BAD58136.1.
RefSeqYP_119500.1. NC_006361.1.

3D structure databases

ProteinModelPortalQ5YUK5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING247156.nfa32890.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD58136; BAD58136; NFA_32890.
GeneID3109364.
KEGGnfa:nfa32890.
PATRIC22736202. VBINocFar94200_3337.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAYHETHFA.
OrthoDBEOG6NKQWZ.
ProtClustDBCLSK635826.

Enzyme and pathway databases

BioCycNFAR247156:GJ9T-3338-MONOMER.

Family and domain databases

InterProIPR000014. PAS.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5YUK5_NOCFA
AccessionPrimary (citable) accession number: Q5YUK5
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: April 16, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)