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Q5YTV3

- Q5YTV3_NOCFA

UniProt

Q5YTV3 - Q5YTV3_NOCFA

Protein

Glutamate decarboxylase

Gene

NFA_35400

Organism
Nocardia farcinica (strain IFM 10152)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 1 (23 Nov 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciNFAR247156:GJ9T-3590-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:NFA_35400Imported
    OrganismiNocardia farcinica (strain IFM 10152)Imported
    Taxonomic identifieri247156 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia
    ProteomesiUP000006820: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi247156.nfa35400.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5YTV3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.
    OMAiAQYYTFL.
    OrthoDBiEOG6TFCPW.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q5YTV3-1 [UniParc]FASTAAdd to Basket

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    MPLSHPSFPQ DPGPSEVAVN PVFTREPVSV PRDRLPAGEL DADIAYQVVH    50
    DELMLDGNAR LNLATFVTTW MEPSARVLMA ECFDKNMIDK DEYPRTADLE 100
    QRCVRMLADL WHAADPAHAT GCSTTGSSEA CMLAGLALKR RWQHRRRAAG 150
    LSTERPNLVM GANVQVCWEK FADYWDVEAR LVPMAGDRFH LTAEAALPHC 200
    DENTIGVVAV LGSTFDGSYE PVAEICAALD ELERQRGWDI PVHVDGASGA 250
    MVAPFCDPDL VWDFRLPRVA SVNTSGHKYG LVYPGVGWVV WRDAAALPED 300
    LIFRVNYLGG QMPTFALNFS RPGAQVVAQY YTFLRLGRSG YTRVQQYCRD 350
    VATRLADRIA ALGAFRLLTD GRQLPVFAFT LAEGETGYSV FDVSAALREQ 400
    GWLVPAYTFP ADREDLAVLR IVVRNGFSHD LADMLLDALA AVLPRLRAQD 450
    RPQHGPDTAT FAHGAQAPSG H 471
    Length:471
    Mass (Da):51,908
    Last modified:November 23, 2004 - v1
    Checksum:i930575B0765E6AB4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006618 Genomic DNA. Translation: BAD58388.1.
    RefSeqiWP_011210073.1. NC_006361.1.
    YP_119752.1. NC_006361.1.

    Genome annotation databases

    EnsemblBacteriaiBAD58388; BAD58388; NFA_35400.
    GeneIDi3107631.
    KEGGinfa:nfa35400.
    PATRICi22736696. VBINocFar94200_3584.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006618 Genomic DNA. Translation: BAD58388.1 .
    RefSeqi WP_011210073.1. NC_006361.1.
    YP_119752.1. NC_006361.1.

    3D structure databases

    ProteinModelPortali Q5YTV3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 247156.nfa35400.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD58388 ; BAD58388 ; NFA_35400 .
    GeneIDi 3107631.
    KEGGi nfa:nfa35400.
    PATRICi 22736696. VBINocFar94200_3584.

    Phylogenomic databases

    KOi K01580.
    OMAi AQYYTFL.
    OrthoDBi EOG6TFCPW.

    Enzyme and pathway databases

    BioCyci NFAR247156:GJ9T-3590-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: IFM 10152Imported.

    Entry informationi

    Entry nameiQ5YTV3_NOCFA
    AccessioniPrimary (citable) accession number: Q5YTV3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 23, 2004
    Last sequence update: November 23, 2004
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3