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Q5YTR9 (Q5YTR9_NOCFA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transaldolase HAMAP MF_00493
EC=2.2.1.2 HAMAP MF_00493
Gene names
Name:tal HAMAP MF_00493
Ordered Locus Names:NFA_35740
OrganismNocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP]
Taxonomic identifier247156 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway By similarity. HAMAP MF_00493 SAAS SAAS001585

Catalytic activity

Sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate. HAMAP MF_00493 SAAS SAAS001585

Pathway

Carbohydrate degradation; pentose phosphate pathway; D-glyceraldehyde 3-phosphate and beta-D-fructose 6-phosphate from D-ribose 5-phosphate and D-xylulose 5-phosphate (non-oxidative stage): step 2/3. HAMAP MF_00493 SAAS SAAS001585

Subcellular location

Cytoplasm By similarity HAMAP MF_00493.

Sequence similarities

Belongs to the transaldolase family. Type 2 subfamily. HAMAP MF_00493

Ontologies

Keywords
   Biological processPentose shunt HAMAP MF_00493 SAAS SAAS001585
   Cellular componentCytoplasm HAMAP MF_00493 SAAS SAAS001585
   Molecular functionTransferase HAMAP MF_00493 SAAS SAAS001585
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processpentose-phosphate shunt

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionsedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1421 By similarity HAMAP MF_00493

Sequences

Sequence LengthMass (Da)Tools
Q5YTR9 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 458B337A3934B625

FASTA38040,578
        10         20         30         40         50         60 
MAQNENIAAL AAAGVSVWLD DLSRDRIRSG NLAELVRTRG VVGVTTNPTI FQGALSKGHA 

        70         80         90        100        110        120 
YDAQLKELAA QGADADAAIR TITTDDVREA CDVLAPVYEA TGGLDGRVSI EVDPRFAFDA 

       130        140        150        160        170        180 
DKTVAQAVDL WKTVDRPNLF IKIPATEEGL PAITAVIAEG ISVNVTLIFS VRRYRAVMGA 

       190        200        210        220        230        240 
YLDGLRKARV AGHDLAKIHS VASFFVSRVD TEIDKRLAAI GTPEALELRG KAGIANARLA 

       250        260        270        280        290        300 
YAEYQDVFDG GAHTSTYQHL AAAGARRQRP LWASTGVKNP DYPDTMYVTE LVAPNTVNTL 

       310        320        330        340        350        360 
PEKTLEAVAD HGEIRGDTVS GTAAEAAEVF ERLRAVGIDL DDVFAVLERE GVEKFEASWA 

       370        380 
ELLSATAEEL RAAASGSEGN

« Hide

References

[1]"The complete genomic sequence of Nocardia farcinica IFM 10152."
Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M.
Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IFM 10152.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP006618 Genomic DNA. Translation: BAD58422.1.
RefSeqYP_119786.1. NC_006361.1.

3D structure databases

ProteinModelPortalQ5YTR9.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3108408.
GenomeReviewsGene locus NFA_35740 in contig AP006618_GR.
KEGGnfa:nfa35740.
NMPDRfig|247156.1.peg.3488.
PATRIC22736764. VBINocFar94200_3618.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG321149.
OMAMPEKTLD.
ProtClustDBPRK03343.

Family and domain databases

HAMAPMF_00493. Transaldolase_2.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR001585. Transaldolase.
IPR004732. Transaldolase_2.
IPR018225. Transaldolase_AS.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK00616.
PANTHERPTHR10683. Transaldolase. 1 hit.
PfamPF00923. Transaldolase. 1 hit.
[Graphical view]
PIRSFPIRSF036915. Trnald_Bac_Plnt. 1 hit.
TIGRFAMsTIGR00876. Tal_mycobact. 1 hit.
PROSITEPS01054. TRANSALDOLASE_1. 1 hit.
PS00958. TRANSALDOLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5YTR9_NOCFA
AccessionPrimary (citable) accession number: Q5YTR9
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: December 14, 2011
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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