Q5YSA3 (Q5YSA3_NOCFA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Methionine aminopeptidase RuleBase RU003653
EC=3.4.11.18 RuleBase RU003653

Gene names

Name:	map EMBL BAD58938.1
Ordered Locus Names:	NFA_40890

Organism

Nocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP]

Taxonomic identifier

247156 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia

Protein attributes

Sequence length	287 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Removes the N-terminal methionine from nascent proteins By similarity. RuleBase RU003653
Catalytic activity	Release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. RuleBase RU003653
Cofactor	Binds 2 cobalt ions per subunit By similarity. RuleBase RU003653
Sequence similarities	Belongs to the peptidase M24A family. RuleBase RU003653

Ontologies

Keywords
Ligand	Cobalt RuleBase RU003653 Metal-binding RuleBase RU003653
Molecular function	Aminopeptidase RuleBase RU003653 EMBL BAD58938.1 Hydrolase Protease
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular process Inferred from electronic annotation. Source: InterPro proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	aminopeptidase activity Inferred from electronic annotation. Source: UniProtKB-KW metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW metalloexopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5YSA3 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 473099D009C55299	FASTA	287	31,698
	10 20 30 40 50 60 MSVRTRQPLV PGTPTPIREV PRSIERPEYA WKKTAKEGSE PWVQTPETIE KMRIACRIAA 70 80 90 100 110 120 QALEEAGKAV APGVTTDELD RIAHEYMCDH GAYPSTLGYK GFPKSCCTSL NEVICHGIPD 130 140 150 160 170 180 STVIQDGDIV NIDVTAYIHG VHGDTNKTFL AGDVDEEVRL LVERTEEATN RAIKAVRPGR 190 200 210 220 230 240 ALNVIGRVIE AYANRFGYGV VRDFTGHGVG PTFHNGLVIL HYDQPAVETV IEPGMTFTIE 250 260 270 280 PMINLGGIDY EIWDDGWTVV TKDRKWTAQF EHTLVVTETG AEVLTLP

References

[1]

"The complete genomic sequence of Nocardia farcinica IFM 10152." Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M. Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IFM 10152.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006618 Genomic DNA. Translation: BAD58938.1.
RefSeq	YP_120302.1. NC_006361.1.
3D structure databases
ProteinModelPortal	Q5YSA3.
SMR	Q5YSA3. Positions 6-285.
ModBase	Search...
Protein family/group databases
MEROPS	M24.001.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3111231.
GenomeReviews	Gene locus NFA_40890 in contig AP006618_GR.
KEGG	nfa:nfa40890.
NMPDR	fig|247156.1.peg.3947.
PATRIC	22737720. VBINocFar94200_4089.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG299384.
OMA	IEPMISE.
ProtClustDB	PRK12896.
Family and domain databases
InterPro	IPR001714. Pept_M24_MAP. IPR000994. Pept_M24_structural-domain. IPR002467. Pept_M24A_MAP1. [Graphical view]
Gene3D	G3DSA:3.90.230.10. Peptidase_M24_cat_core. 1 hit.
KO	K01265.
Pfam	PF00557. Peptidase_M24. 1 hit. [Graphical view]
PRINTS	PR00599. MAPEPTIDASE.
SUPFAM	SSF55920. Peptidase_M24_cat_core. 1 hit.
TIGRFAMs	TIGR00500. Met_pdase_I. 1 hit.
PROSITE	PS00680. MAP_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5YSA3_NOCFA

Accession

Primary (citable) accession number: Q5YSA3

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	December 14, 2011
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)