Q5YS61 (RS2_NOCFA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S2

Gene names

Name:	rpsB
Ordered Locus Names:	NFA_41310

Organism

Nocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP]

Taxonomic identifier

247156 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia

Protein attributes

Sequence length	285 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 285	285	30S ribosomal protein S2 HAMAP MF_00291_B		PRO_0000134207

Sequences

	Sequence		Length	Mass (Da)
	Q5YS61 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 256CC5EF18E7DB58	FASTA	285	31,069
	10 20 30 40 50 60 MAVVTMKQLL DSGAHFGHQT RRWNPKMKRF IFTDRNGIYI IDLQQTLTYI DKAYEFVKET 70 80 90 100 110 120 VAHGGTVLFV GTKKQAQESI AAEATRVGMP YVNQRWLGGM LTNFSTVHKR LQRLKELEAM 130 140 150 160 170 180 EQTGGFEGRT KKEILMLTRE MNKLERTLGG IRDMQKVPSA IWVVDTNKEH IAVGEARKLN 190 200 210 220 230 240 IPVIAILDTN CDPDLVDYPI PGNDDAIRSA ALLTKVVASA VAEGVQARAG LASGDAKPEA 250 260 270 280 GAGEPLAEWE QELLAQANPN AEGSAEAAPA AATEEAPAAQ TPADF

References

[1]

"The complete genomic sequence of Nocardia farcinica IFM 10152." Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M. Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IFM 10152.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006618 Genomic DNA. Translation: BAD58980.1.
RefSeq	YP_120344.1. NC_006361.1.
3D structure databases
ProteinModelPortal	Q5YS61.
SMR	Q5YS61. Positions 6-228.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3111511.
GenomeReviews	Gene locus NFA_41310 in contig AP006618_GR.
KEGG	nfa:nfa41310.
NMPDR	fig|247156.1.peg.3988.
PATRIC	22737800. VBINocFar94200_4129.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG736296.
OMA	KQAQDSV.
ProtClustDB	PRK05299.
Enzyme and pathway databases
BioCyc	NFAR247156:NFA41310-MONOMER.
Family and domain databases
HAMAP	MF_00291_B. Ribosomal_S2_B. [Tree]
InterPro	IPR001865. Ribosomal_S2. IPR005706. Ribosomal_S2_bac/mit/plastid. IPR018130. Ribosomal_S2_CS. IPR023591. Ribosomal_S2_flav_dom. [Graphical view]
KO	K02967.
PANTHER	PTHR12534. Ribosom_S2_bac. 1 hit.
Pfam	PF00318. Ribosomal_S2. 1 hit. [Graphical view]
PRINTS	PR00395. RIBOSOMALS2.
SUPFAM	SSF52313. Ribosomal_S2. 1 hit.
TIGRFAMs	TIGR01011. RpsB_bact. 1 hit.
PROSITE	PS00962. RIBOSOMAL_S2_1. 1 hit. PS00963. RIBOSOMAL_S2_2. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS2_NOCFA

Accession

Primary (citable) accession number: Q5YS61

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 15, 2005
Last sequence update:	November 23, 2004
Last modified:	January 25, 2012
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program