Q5YS30 (Q5YS30_NOCFA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase HAMAP MF_00277
Short name=PII uridylyl-transferase HAMAP MF_00277
EC=2.7.7.59 HAMAP MF_00277

Alternative name(s):
UTase HAMAP MF_00277
Uridylyl-removing enzyme HAMAP MF_00277

Gene names

Name:	glnD HAMAP MF_00277 EMBL BAD59011.1
Ordered Locus Names:	NFA_41620

Organism

Nocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP]

Taxonomic identifier

247156 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia

Protein attributes

Sequence length	817 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein By similarity. SAAS SAAS002912 HAMAP MF_00277
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. SAAS SAAS002912 HAMAP MF_00277
Sequence similarities	Belongs to the glnD family. HAMAP MF_00277

Ontologies

Keywords
Molecular function	Nucleotidyltransferase SAAS SAAS002912 HAMAP MF_00277 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP amino acid binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5YS30 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: C0E328E60B53B5B8	FASTA	817	87,267
	10 20 30 40 50 60 MKRVVVVGSG SRRTDSGPAK AGGAADLVRA RAQLLEGGLP RNPRLDAASL RQALVDLYEL 70 80 90 100 110 120 WLTGKGAELG ITADSGLAVV AVGGLGRKEM LPYSDLDLVL LHDEVDPARV AEVADQLWYP 130 140 150 160 170 180 LWDAHIKLDH SVRTVPQALR VAGDDLIAAL GMLEARHIVG DVELSNLLIG GVRREWRNGI 190 200 210 220 230 240 RHRFDDLVAQ AEARWQRCGE IAHRAEPDLK NGRGGLRDIQ LLDALAVAHL TDAMPGLGPE 250 260 270 280 290 300 VPGGGLRQAH RRLLDVRTEL HRVAGRGRDQ LRAQDADEIG AALRIGDRFD LARTLSDSAR 310 320 330 340 350 360 TVSYSVEVGL RTAANALPRR GLARLRRMPV RRPLDEGVVE HAGEVVLARD ARPQRDPGLI 370 380 390 400 410 420 LRVAAASAQT GLPMSATTLN RLSEDAPELR EPWPKDALND LLVLLGAGRG VIAAIEALDR 430 440 450 460 470 480 TGLWGRLLPE WGAVRDLPPR DVLHTWTVDR HLMETVAYAS ALSTRVARPD LLALGALLHD 490 500 510 520 530 540 IGKGRQGDHS LVGAELATQI GRRLGLWPSD VRTLSAIVRH HLLLPDTATR RDLDDPQTVR 550 560 570 580 590 600 HVVEALDGDP QLLELLHTLA EADSLATGPG VWGEWKASLI GDLVRRCRAV MAGDALPTPA 610 620 630 640 650 660 PIAPELLAKA AAGGVHVELA PGEGKFSHVV TVIAPDAPGL LSDAAGVLAL HSLRVLSASL 670 680 690 700 710 720 GVHGDSAVDT FVVTPKFGDP PDPGLLRQEL IRAIAGDLDL PAVLAERERA AVGAGRGPYA 730 740 750 760 770 780 QAQPRLLWTP TGTPGQVILE LRAEDRIGLL SRLAAAFADC GANVRWAKIV TMGAAVVDAF 790 800 810 CLELGGPDEQ AQRAALTDAV LRVVPQPAPK PPEETPA

References

[1]

"The complete genomic sequence of Nocardia farcinica IFM 10152." Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M. Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IFM 10152.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006618 Genomic DNA. Translation: BAD59011.1.
RefSeq	YP_120375.1. NC_006361.1.
3D structure databases
ProteinModelPortal	Q5YS30.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3109592.
GenomeReviews	Gene locus NFA_41620 in contig AP006618_GR.
KEGG	nfa:nfa41620.
NMPDR	fig|247156.1.peg.4016.
PATRIC	22737858. VBINocFar94200_4158.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG350889.
OMA	LPHTATR.
ProtClustDB	PRK03381.
Family and domain databases
HAMAP	MF_00277. PII_uridylyl_transf. [Tree]
InterPro	IPR002912. ACT-bd. IPR010043. GlnD_Uridyltrans. IPR023279. HD. IPR003607. Metal-dep_PHydrolase_HD_dom. IPR006674. Metal-dep_PHydrolase_HD_sub. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. IPR006675. Uncharacterised_HDIG. [Graphical view]
Gene3D	G3DSA:1.10.3210.10. HD. 1 hit.
KO	K00990.
PANTHER	PTHR13734:SF1. GlnD_Uridyltrans. 1 hit.
Pfam	PF01842. ACT. 2 hits. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR00277. HDIG. 1 hit. TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5YS30_NOCFA

Accession

Primary (citable) accession number: Q5YS30

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	January 25, 2012
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)