Q5YQJ5 (Q5YQJ5_NOCFA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative 2-oxoglutarate dehydrogenase EMBL BAD59546.1

Gene names

Name:	sucA EMBL BAD59546.1
Ordered Locus Names:	NFA_46950

Organism

Nocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP]

Taxonomic identifier

247156 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia

Protein attributes

Sequence length	1268 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family. RuleBase RU003423

Ontologies

Keywords
Ligand	Thiamine pyrophosphate SAAS SAAS001017
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: InterPro thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring acyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5YQJ5 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: C54A8B5967DF08C6	FASTA	1,268	139,128
	10 20 30 40 50 60 MYQKFKQDPS SVDESWHEFL ADYTPDTTTD ASDNGQQPPA PTTASPPGQA PARPAAAPSA 70 80 90 100 110 120 PASQQAAPAQ STAKPQQPAA KPQQAAAKPQ QAAPKATESK ATESKAAAPK ATAAKGTART 130 140 150 160 170 180 PQTTPAPTSN AAPTSGGPKS AEAADESKVL RGAAAAVAKN MSASLSIPTA TSVRAIPAKL 190 200 210 220 230 240 MIDNRLVINN HLARTRGGKI SFTHLLGYAI VQAVKAFPNM NRHFAEIDGK PHAVTPAHTN 250 260 270 280 290 300 LGLAIDLPGK DGSRSLVVAA IKGAEEMTFA QFHSAYEDIV RRAREGKLTT EDFSGVTISL 310 320 330 340 350 360 TNPGTIGTVH SVPRLMPGQG AIIGAGAMEY PAEFQGMSDE RIADIGVGKL MTLTSTYDHR 370 380 390 400 410 420 IIQGAESGDF LRTIHQLLIS DEFYDEIFHG LGVPYEPVRW RKDIKERGVD KSTRVLEMIS 430 440 450 460 470 480 AYRNRGHLMA DTDPLHLVKD KFRSHPDLDV TQHGLTLWDL DREFNVGGFH GQERMKLRDV 490 500 510 520 530 540 LSVLRDAYCR HVGVEYMHIL DPEQLQWIQE RVEQKHVKPT VAQQKYILNR LNAAEAFETF 550 560 570 580 590 600 LQTKYVGQKR FSLEGAESVI PMMDAVIDQC AEHALDEVVI GMPHRGRLNV LANIVGKPYS 610 620 630 640 650 660 KIFTEFEGNM NPAATHGSGD VKYHLGAEGT YLQMFGDNEI KVSLTANPSH LEAVDPVLEG 670 680 690 700 710 720 LVRAKQDLLD KGDGPEGFSV VPLMLHGDAA FAGQGVVAET LNLSGLRGYR TGGTIHIVVN 730 740 750 760 770 780 NQIGFTTAPE NSRSTEYSTD IAKFIGAPIF HVNGDDPEAC DWVARLAVDF RQKFRKDVVI 790 800 810 820 830 840 DLICYRRRGH NEGDDPSMTQ PYMYDVIDTK RSVRKSYTES LIGRGDISLK EAEDALRDYQ 850 860 870 880 890 900 GQLERVFNEV RELEKYPPGP SESVEDDQRV PGTVHTAVDK SVLQRIGDAF INVPEGFNVH 910 920 930 940 950 960 PRVKPVLEKR REMAYEGKID WAFAELLAFG TLIDEGRAVR LTGQDSRRGT FTQRHAVIID 970 980 990 1000 1010 1020 RKTAAEYTPL HNIGSANPGW FAVHDSALSE FAAVGFEYGY SLGNPDALVL WEAQFGDFVN 1030 1040 1050 1060 1070 1080 GAQSIIDEFI SSGEAKWGQL SDVVLLLPHG HEGQGPDHTS GRIERFLQLC AEGSMTVAVP 1090 1100 1110 1120 1130 1140 STPANYFHLL RRHALDGIRR PLIVFTPKSM LRNKAVVSDL KDFTESKFRS VFDEPAYEQG 1150 1160 1170 1180 1190 1200 IGDRSKVKRI LLTSGKLYYE LAAEKAKQKR EDVAIVRVEQ LYPVPKFRIN EALGGYPNAT 1210 1220 1230 1240 1250 1260 DIAWVQEEPA NQGAWPFFGL NLPEMLPDRL GKLRRISRRA MSAPSSGSSK VHAVEQAEII AEAFEPTS

References

[1]

"The complete genomic sequence of Nocardia farcinica IFM 10152." Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M. Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IFM 10152.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006618 Genomic DNA. Translation: BAD59546.1.
RefSeq	YP_120910.2. NC_006361.1.
3D structure databases
ProteinModelPortal	Q5YQJ5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3111577.
GenomeReviews	Gene locus NFA_46950 in contig AP006618_GR.
KEGG	nfa:nfa46950.
NMPDR	fig|247156.1.peg.4514.
PATRIC	22738966. VBINocFar94200_4708.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG289950.
OMA	EGDEPAF.
ProtClustDB	PRK12270.
Family and domain databases
InterPro	IPR001078. 2-oxoacid_DH_actylTfrase. IPR011603. 2oxoglutarate_DH_E1. IPR023213. CAT-like_dom. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
Gene3D	G3DSA:3.30.559.10. CAT-like_dom. 1 hit.
KO	K01616.
PANTHER	PTHR23152. 2oxoglutarate_DH_E1. 1 hit.
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5YQJ5_NOCFA

Accession

Primary (citable) accession number: Q5YQJ5

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	December 14, 2011
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)