Q5YPG9 (Q5YPG9_NOCFA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative glutamate racemase EMBL BAD59922.1

Gene names

Name:	murI EMBL BAD59922.1
Ordered Locus Names:	NFA_50700

Organism

Nocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP]

Taxonomic identifier

247156 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia

Protein attributes

Sequence length	253 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Provides the (R)-glutamate required for cell wall biosynthesis By similarity. SAAS SAAS015942
Catalytic activity	L-glutamate = D-glutamate. SAAS SAAS015942
Pathway	Cell wall biogenesis; peptidoglycan biosynthesis. SAAS SAAS015942

Ontologies

Keywords
Biological process	Cell shape Cell wall biogenesis/degradation SAAS SAAS015942 Peptidoglycan synthesis SAAS SAAS015942
Molecular function	Isomerase SAAS SAAS015942
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW regulation of cell shape Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	glutamate racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5YPG9 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 38FE5C9C59361335	FASTA	253	25,864
	10 20 30 40 50 60 MIVALIDSGL GLLPTAAWLR KLRPDVDLLL QLDPDGAPWG PKPEQWTIER VVAAARISIA 70 80 90 100 110 120 AGAEVIVLPC NTASVTALEQ VRAEVGPEVP VIGTVPAIKP AAAACRRVAV WATAATTASR 130 140 150 160 170 180 YQAELIEKFG GDAEVVGVAC HGLADAIDRG DLTAATDAIA RAAAQTPAGT EGVVLGCTHY 190 200 210 220 230 240 PLVVDAIVAA LPAGVRLFDS AQAVAAQTIR KMEGLGRPTT GEGVVRVLNS GRPGTLPPSA 250 AAYEPGRILG AQP

References

[1]

"The complete genomic sequence of Nocardia farcinica IFM 10152." Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M. Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IFM 10152.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006618 Genomic DNA. Translation: BAD59922.1.
RefSeq	YP_121286.1. NC_006361.1.
3D structure databases
ProteinModelPortal	Q5YPG9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3111310.
GenomeReviews	Gene locus NFA_50700 in contig AP006618_GR.
KEGG	nfa:nfa50700.
NMPDR	fig|247156.1.peg.4871.
PATRIC	22739711. VBINocFar94200_5078.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG645102.
OMA	QCHVRLV.
ProtClustDB	CLSK520031.
Family and domain databases
InterPro	IPR015942. Asp/Glu/hydantoin_racemase. IPR001920. Asp/Glu_race. IPR018187. Asp/Glu_racemase_AS. IPR004391. Glu_race. [Graphical view]
Gene3D	G3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
KO	K01776.
PANTHER	PTHR21198. PTHR21198. 1 hit.
Pfam	PF01177. Asp_Glu_race. 1 hit. [Graphical view]
SUPFAM	SSF53681. Asp/Glu_race. 2 hits.
PROSITE	PS00923. ASP_GLU_RACEMASE_1. 1 hit. PS00924. ASP_GLU_RACEMASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5YPG9_NOCFA

Accession

Primary (citable) accession number: Q5YPG9

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)