Q5YPC7 (RL10_NOCFA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L10

Gene names

Name:	rplJ
Ordered Locus Names:	NFA_51120

Organism

Nocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP]

Taxonomic identifier

247156 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia

Protein attributes

Sequence length	176 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L10P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	ribosome biogenesis Inferred from electronic annotation. Source: InterPro translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 176	176	50S ribosomal protein L10 HAMAP MF_00362		PRO_0000154678

Sequences

	Sequence		Length	Mass (Da)
	Q5YPC7 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 0BD3FE70D24C4529	FASTA	176	18,217
	10 20 30 40 50 60 MAKAEKVTAV AEIAEQFKSS TATVVTEYRG LSVGKLTELR RALGAEATYS VAKNTLVKRA 70 80 90 100 110 120 AAEAGVEGLD DLFVGPTAIT FIKGEPVNAA KALKTFAKEN KALIIKGGYM DGAALSVAEV 130 140 150 160 170 EQIADLETRE VLLAKLAGAL KGNLAKAAGL FNAPASQVAR LAAALEEKKR AEGGAE

References

[1]

"The complete genomic sequence of Nocardia farcinica IFM 10152." Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M. Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IFM 10152.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006618 Genomic DNA. Translation: BAD59964.1.
RefSeq	YP_121328.1. NC_006361.1.
3D structure databases
ProteinModelPortal	Q5YPC7.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3111475.
GenomeReviews	Gene locus NFA_51120 in contig AP006618_GR.
KEGG	nfa:nfa51120.
NMPDR	fig|247156.1.peg.4911.
PATRIC	22739795. VBINocFar94200_5120.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG597359.
OMA	GICKVTK.
ProtClustDB	PRK00099.
Enzyme and pathway databases
BioCyc	NFAR247156:NFA51120-MONOMER.
Family and domain databases
HAMAP	MF_00362. Ribosomal_L10. [Tree]
InterPro	IPR022973. Ribosomal_L10. IPR001790. Ribosomal_L10/acidic_P0. IPR002363. Ribosomal_L10_eubac_CS. [Graphical view]
KO	K02864.
PANTHER	PTHR11560:SF8. PTHR11560:SF8. 1 hit.
Pfam	PF00466. Ribosomal_L10. 1 hit. [Graphical view]
PROSITE	PS01109. RIBOSOMAL_L10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL10_NOCFA

Accession

Primary (citable) accession number: Q5YPC7

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 15, 2005
Last sequence update:	November 23, 2004
Last modified:	January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program