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Q5YP27 (Q5YP27_NOCFA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:NFA_52120 EMBL BAD60064.1
OrganismNocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP] EMBL BAD60064.1
Taxonomic identifier247156 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia

Protein attributes

Sequence length472 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5YP27 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 7891DE75FB14C227

FASTA47252,967
        10         20         30         40         50         60 
MAKQVPTSRL ARGTKLGAVA AGSVLRTQRT RLSMRGRSEA VRAKMAEESM IRTTEQVVAV 

        70         80         90        100        110        120 
LGTMKGVAMK LGQMMSVLDL DLVPEAHRER FQQRLAVLRN AAPTVPFEGM RRVVEEDFGA 

       130        140        150        160        170        180 
PLDTVFAEFE PEPIAAASIG QVYRARLHDG RVVAVKVQYP GIDAAVRADL KNLTMFRKVL 

       190        200        210        220        230        240 
QSAMPWVTPA VLDELRLNIE SELDYRAEAQ TQAELAELYA DHPFIVVPGT LLELSTTRVL 

       250        260        270        280        290        300 
VSEYLPGRGF DEIRGLPDAD RNRIGEIIYR FYVGSLFEFA EFCGDPHPGN VLLLDDGRVG 

       310        320        330        340        350        360 
FLDFGLFNRM DPAHVRFEIT CLRAAAEERA EDLRQLMIQR GVIDSPEEIG AEECLEYVLA 

       370        380        390        400        410        420 
ASEWCLVDEE LTITPELASG AFLLAVDPRA SEFAGMKQQN LPPEHLFSRR ADFLTFGMLG 

       430        440        450        460        470 
QLHTTANWHR IAREWLYDED PVTELGRAHR QWLAQRTPPK PARARKKTAT RR 

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References

[1]"The complete genomic sequence of Nocardia farcinica IFM 10152."
Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M.
Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IFM 10152 EMBL BAD60064.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006618 Genomic DNA. Translation: BAD60064.1.
RefSeqYP_121428.1. NC_006361.1.

3D structure databases

ProteinModelPortalQ5YP27.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING247156.nfa52120.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD60064; BAD60064; NFA_52120.
GeneID3110700.
KEGGnfa:nfa52120.
PATRIC22740013. VBINocFar94200_5225.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAPNPGNYI.
OrthoDBEOG68Q0KW.

Enzyme and pathway databases

BioCycNFAR247156:GJ9T-5283-MONOMER.

Family and domain databases

InterProIPR011009. Kinase-like_dom.
IPR004147. UbiB_dom.
[Graphical view]
PfamPF03109. ABC1. 1 hit.
[Graphical view]
SUPFAMSSF56112. SSF56112. 2 hits.
ProtoNetSearch...

Entry information

Entry nameQ5YP27_NOCFA
AccessionPrimary (citable) accession number: Q5YP27
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: May 14, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)