Q5YP02 (ALLC_NOCFA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Probable allantoicase
EC=3.5.3.4

Alternative name(s):
Allantoate amidinohydrolase

Gene names

Name:	alc
Ordered Locus Names:	NFA_52370

Organism

Nocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP]

Taxonomic identifier

247156 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia

Protein attributes

Sequence length	329 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Allantoate + H2O = (S)-ureidoglycolate + urea. HAMAP MF_00813
Pathway	Nitrogen metabolism; (S)-allantoin degradation; (S)-ureidoglycolate from allantoate (aminidohydrolase route): step 1/1. HAMAP MF_00813
Sequence similarities	Belongs to the allantoicase family.

Ontologies

Keywords
Biological process	Purine metabolism
Molecular function	Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	purine base metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	allantoicase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 329	329	Probable allantoicase HAMAP MF_00813		PRO_0000205921

Sequences

	Sequence		Length	Mass (Da)
	Q5YP02 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 3CD6293A987FEF7F	FASTA	329	35,822
	10 20 30 40 50 60 MNETAADRVA PRGFTELPDL AVRSLGGAVI WADDEFFAEK ENLIVPEAPE FRPATYGHRG 70 80 90 100 110 120 QVYDGWETRR HRGLPGDDAA VVRLGVPGVI HGVVVDTSWF TGNYPPAISL SALAIDGYPP 130 140 150 160 170 180 AADIAARTDW VPLLDRVPVR GDARNPFPIP SRDRWTHVRL TMHPDGGIAR LRVHGEGRPD 190 200 210 220 230 240 PALLGLGPVD LAALENGALV LDCSDRFYGS PHQLLHPGNA RRMGDGWETA RRRDDGNDWV 250 260 270 280 290 300 RIRLAGPGLI RLAELDTSYF LGNSPAAARL TGRTTDGTEV ELLPRTPLQP DTRHRFPTAA 310 320 VAASVEEVRL DIYPDGGLAR VRLFGELGG

References

[1]

"The complete genomic sequence of Nocardia farcinica IFM 10152." Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M. Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IFM 10152.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006618 Genomic DNA. Translation: BAD60089.1.
RefSeq	YP_121453.1. NC_006361.1.
3D structure databases
ProteinModelPortal	Q5YP02.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3110724.
GenomeReviews	Gene locus NFA_52370 in contig AP006618_GR.
KEGG	nfa:nfa52370.
NMPDR	fig|247156.1.peg.5034.
PATRIC	22740061. VBINocFar94200_5249.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG480577.
OMA	DTSYFLG.
ProtClustDB	PRK13257.
Enzyme and pathway databases
BioCyc	NFAR247156:NFA52370-MONOMER.
Family and domain databases
HAMAP	MF_00813. Allantoicase. [Tree]
InterPro	IPR005164. Allantoicase. IPR015908. Allantoicase_dom. IPR008979. Galactose-bd-like. [Graphical view]
KO	K01477.
PANTHER	PTHR12045. Allantoicase. 1 hit.
Pfam	PF03561. Allantoicase. 2 hits. [Graphical view]
PIRSF	PIRSF016516. Allantoicase. 1 hit.
SUPFAM	SSF49785. Gal_bind_like. 2 hits.
TIGRFAMs	TIGR02961. Allantoicase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

ALLC_NOCFA

Accession

Primary (citable) accession number: Q5YP02

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 13, 2005
Last sequence update:	November 23, 2004
Last modified:	January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program