Reviewed, UniProtKB/Swiss-Prot Q5YP02 (ALLC_NOCFA)

Names and origin

Protein names

Recommended name:
    Probable allantoicase
    EC=3.5.3.4
Alternative name(s):
    Allantoate amidinohydrolase

Gene names

Name:	alc
Ordered Locus Names:	NFA_52370

Organism

Nocardia farcinica [Complete proteome] [HAMAP]

Taxonomic identifier

37329 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia

Protein attributes

Sequence length	329 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	Allantoate + H2O = (S)-ureidoglycolate + urea. HAMAP MF_00813
Pathway	Nitrogen metabolism; (S)-allantoin degradation; (S)-ureidoglycolate from allantoate (aminidohydrolase route): step 1/1. HAMAP MF_00813
Sequence similarities	Belongs to the allantoicase family.

Ontologies

Keywords
Biological process	Purine metabolism
Molecular function	Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	allantoin catabolic process Inferred from electronic annotation. Source: HAMAP purine base metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	allantoicase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 329	329	Probable allantoicase HAMAP MF_00813		PRO_0000205921

Sequences

	Sequence		Length	Mass (Da)
	Q5YP02-1 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 3CD6293A987FEF7F	FASTA	329	35,822
	10 20 30 40 50 60 MNETAADRVA PRGFTELPDL AVRSLGGAVI WADDEFFAEK ENLIVPEAPE FRPATYGHRG 70 80 90 100 110 120 QVYDGWETRR HRGLPGDDAA VVRLGVPGVI HGVVVDTSWF TGNYPPAISL SALAIDGYPP 130 140 150 160 170 180 AADIAARTDW VPLLDRVPVR GDARNPFPIP SRDRWTHVRL TMHPDGGIAR LRVHGEGRPD 190 200 210 220 230 240 PALLGLGPVD LAALENGALV LDCSDRFYGS PHQLLHPGNA RRMGDGWETA RRRDDGNDWV 250 260 270 280 290 300 RIRLAGPGLI RLAELDTSYF LGNSPAAARL TGRTTDGTEV ELLPRTPLQP DTRHRFPTAA 310 320 VAASVEEVRL DIYPDGGLAR VRLFGELGG

References

[1]

"The complete genomic sequence of Nocardia farcinica IFM 10152." Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M. Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IFM 10152.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AP006618 Genomic DNA. Translation: BAD60089.1.
RefSeq	YP_121453.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	3110724.
GenomeReviews	Gene locus NFA_52370 in contig AP006618_GR.
KEGG	nfa:nfa52370.
NMPDR	fig|247156.1.peg.5034.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q5YP02.
OMA	MANPILD.
Enzyme and pathway databases
BioCyc	NFAR247156:NFA52370-MON.
BRENDA	3.5.3.4. 290697.
Family and domain databases
HAMAP	MF_00813. [Tree]
InterPro	IPR005164. Allantoicase. IPR015908. Allantoicase_region. [Graphical view]
PANTHER	PTHR12045. Allantoicase. 1 hit.
Pfam	PF03561. Allantoicase. 2 hits. [Graphical view]
PIRSF	PIRSF016516. Allantoicase. 1 hit.
TIGRFAMs	TIGR02961. allantoicase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

ALLC_NOCFA

Accession

Primary (citable) accession number: Q5YP02

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 13, 2005
Last sequence update:	November 23, 2004
Last modified:	November 3, 2009
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)