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Q5YNG0 (DCD_NOCFA) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Deoxycytidine triphosphate deaminase

Short name=dCTP deaminase
EC=3.5.4.13
Gene names
Name:dcd
Ordered Locus Names:NFA_54290
OrganismNocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP]
Taxonomic identifier247156 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia

Protein attributes

Sequence length199 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Keywords
   Biological processNucleotide metabolism
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processdUMP biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

dUTP biosynthetic process

Inferred from electronic annotation. Source: InterPro

pyrimidine ribonucleotide biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functiondCTP deaminase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 199199Deoxycytidine triphosphate deaminase HAMAP-Rule MF_00146
PRO_1000009774

Sequences

Sequence LengthMass (Da)Tools
Q5YNG0 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: FDA83FBFBFA3282F

FASTA19921,594
        10         20         30         40         50         60 
MLLSDRDIRA EIAAGRLGVE PLLENLIQPS SIDVRLDRMF RVFDNSRYTH IDPAQRQDEL 

        70         80         90        100        110        120 
TSLVEPGEGE PFVLHPGEFV LGSTLEVCTL PDDLAGRLEG KSSLGRLGLL THSTAGFIDP 

       130        140        150        160        170        180 
GFSGHITLEL SNVANLPITL WPGMKIGQLC LFRLSSPAEH PYGSAAAGSK YQGQRGPTPS 

       190 
RSYLNFPLPS DAVDAVESR 

« Hide

References

[1]"The complete genomic sequence of Nocardia farcinica IFM 10152."
Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M.
Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IFM 10152.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006618 Genomic DNA. Translation: BAD60281.1.
RefSeqYP_121645.1. NC_006361.1.

3D structure databases

ProteinModelPortalQ5YNG0.
SMRQ5YNG0. Positions 1-186.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING247156.nfa54290.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD60281; BAD60281; NFA_54290.
GeneID3109810.
KEGGnfa:nfa54290.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0717.
KOK01494.
OMANFHRTEI.
OrthoDBEOG67DPKR.

Enzyme and pathway databases

BioCycNFAR247156:GJ9T-5500-MONOMER.
UniPathwayUPA00610; UER00665.

Family and domain databases

Gene3D2.70.40.10. 1 hit.
HAMAPMF_00146. dCTP_deaminase.
InterProIPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view]
PfamPF00692. dUTPase. 1 hit.
[Graphical view]
SUPFAMSSF51283. SSF51283. 1 hit.
TIGRFAMsTIGR02274. dCTP_deam. 1 hit.
ProtoNetSearch...

Entry information

Entry nameDCD_NOCFA
AccessionPrimary (citable) accession number: Q5YNG0
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: November 23, 2004
Last modified: June 11, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways