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Q5YML6 (Q5YML6_NOCFA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PNF1_490 EMBL BAD60575.1
Encoded onPlasmid pNF1 EMBL BAD60575.1
OrganismNocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP] EMBL BAD60575.1
Taxonomic identifier247156 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia

Protein attributes

Sequence length260 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Plasmid EMBL BAD60575.1
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q5YML6 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 054409DB32249CA1

FASTA26027,592
        10         20         30         40         50         60 
MNNKSGARSS KRGPRAGKKA TAAAIGGKQP PWLLIGAAAA IILLTVGLAL YYVPKYREYS 

        70         80         90        100        110        120 
EAQRYVPGSG QSDPSEMIDG VTKQEYPAGS HVRATQRVAY DQAPPFGGPH DQSWATCTGE 

       130        140        150        160        170        180 
VYTTPIRSEN AVHSLEHGAI WVTYNADRLS GEDLAALRGE VEGKPYMFMS PYPNLDSAVA 

       190        200        210        220        230        240 
LQSWGRQLKL DSVDDPRIRR FVTALRQNPN THPEPGASCA SGGGFDPDAP PPFDPSPPGP 

       250        260 
DAVPLPPAGA GSTTPSGGRR 

« Hide

References

[1]"The complete genomic sequence of Nocardia farcinica IFM 10152."
Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M.
Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IFM 10152 EMBL BAD60575.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006619 Genomic DNA. Translation: BAD60575.1.
RefSeqYP_121939.1. NC_006362.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING247156.pnf1490.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD60575; BAD60575; PNF1_490.
GeneID3111791.
KEGGnfa:pnf1490.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMANTYPEPG.

Enzyme and pathway databases

BioCycNFAR247156:GJ9T-5795-MONOMER.

Family and domain databases

InterProIPR021454. DUF3105.
[Graphical view]
PfamPF11303. DUF3105. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5YML6_NOCFA
AccessionPrimary (citable) accession number: Q5YML6
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: May 1, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)