Q5YKG1 (Q5YKG1_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Galactosylceramidase EMBL AAR26418.1

Gene names

Name:

Galc RGD 1359384

Organism

Rattus norvegicus (Rat) EMBL AAR26418.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	668 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro galactosylceramide catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5YKG1 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 7033207C1A2A1A4E	FASTA	668	75,276
	10 20 30 40 50 60 MTAAAGSASR VAVPLLLCAM LAPSGAYELD DSDGLGLEFD GIGAVSGGGA TSRLLVNYPE 70 80 90 100 110 120 PYRSEILDYL FKPNFGASLH ILKVEIGGDG QTTDGTEPSH MHYELDENYF RGYEWWLMKE 130 140 150 160 170 180 AKKRNPNIIL MGLPWSFPGW LGKGFSWPYV NLQLTAFYIV RWILGAKHYH DLDIDYIGIW 190 200 210 220 230 240 NERPFDANYI KELRKMLDYE GLQRVRIIAS DNLWEPISSS VLLDQELWKV VDVIGAHYPG 250 260 270 280 290 300 TYTVWNAKMS GKKLWSSEDF STVNSNVGAG CWGRILNQNY INGNMTATIA WNLVASYYEE 310 320 330 340 350 360 LPYGRSGLMT AQEPWSGHYV VASPIWVSAH TTQFTQPGWY YLKTVGHLEK GGSYVALTDG 370 380 390 400 410 420 LGNFTIIVET MSRQHSMCIR PYLPYYNVSR QLATFILKGS LKEIQELQVW YTKLGTTPEK 430 440 450 460 470 480 LHFKQLETLW LLDGSGSFSL ELEEDEMFTL TTLTTGHKGS YRPPPKSQPF PTSYKDDFNV 490 500 510 520 530 540 EYPLFSEAPN FADQTGVFEY YTNNEDLEHR FTLRQVLNQR PITWAADASS TISVIGDHHW 550 560 570 580 590 600 SNMTVQCDVY IETPRTGGVF IAGRVNKGGI LIRTASGVFF WIFANGSYRV TADLGGWITY 610 620 630 640 650 660 ASGHADVTAK RWYTLTLGIK GYLASGMLNG KILWENVPVK YPGHGWAAIG THTFEFAQFD NFHVEAAR

References

[1]	Karasawa T., Koike H., Han G.D., Miyauchi N., Harita Y., Suzuki K., Shimizu F., Kawachi H. Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Wistar EMBL AAR26418.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY386370 mRNA. Translation: AAR26418.1.
IPI	IPI00367718.
RefSeq	NP_001005888.1. NM_001005888.1.
UniGene	Rn.30608.
3D structure databases
ProteinModelPortal	Q5YKG1.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q5YKG1. 1 interaction.
STRING	Q5YKG1.
Protein family/group databases
CAZy	GH59. Glycoside Hydrolase Family 59.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	314360.
KEGG	rno:314360.
NMPDR	fig|10116.3.peg.25505.
UCSC	NM_001005888. rat.
Organism-specific databases
CTD	2581.
RGD	1359384. Galc.
Phylogenomic databases
eggNOG	roNOG07047.
GeneTree	ENSGT00390000003303.
HOVERGEN	HBG005800.
InParanoid	Q5YKG1.
OrthoDB	EOG4XSKPG.
PhylomeDB	Q5YKG1.
Gene expression databases
Genevestigator	Q5YKG1.
Family and domain databases
InterPro	IPR001286. Glyco_hydro_59. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01202.
PANTHER	PTHR15172. Glyco_hydro_59. 1 hit.
Pfam	PF02057. Glyco_hydro_59. 1 hit. [Graphical view]
PRINTS	PR00850. GLHYDRLASE59.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...
Other
NextBio	667533.

Entry information

Entry name

Q5YKG1_RAT

Accession

Primary (citable) accession number: Q5YKG1

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	November 16, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)