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Protein

Non-structural protein 3

Gene
N/A
Organism
Rotavirus B (isolate Human/China/ADRV-N J19/1997) (RV ADRV-N) (Rotavirus (isolate novel adult diarrhea rotavirus-J19))
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein 3
Short name:
NSP3
OrganismiRotavirus B (isolate Human/China/ADRV-N J19/1997) (RV ADRV-N) (Rotavirus (isolate novel adult diarrhea rotavirus-J19))
Taxonomic identifieri335103 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirusunclassified rotaviruses
Virus hostiHomo sapiens (Human) [TaxID: 9606]
ProteomesiUP000007663: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 262262Non-structural protein 3PRO_0000369850Add
BLAST

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili137 – 18751Sequence AnalysisAdd
BLAST

Sequence similaritiesi

Belongs to the rotavirus B NSP3 family.Curated

Keywords - Domaini

Coiled coil

Sequencei

Sequence statusi: Complete.

Q5Y9A9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAELVCDALA TLTRNTYGDN DESAKFCRMF RTMIRDSGLY GNIENWRAAF
60 70 80 90 100
YRERLPKRMS HSTVSIQLDN LEREVLKIRA EGFCQGYTRK ERTLNAFDLS
110 120 130 140 150
DDGKGNTIIK PTTHLSSIIL QNSYNSAFKL PKIPDGLLEK TRYELEEEKK
160 170 180 190 200
NNDILKQKIK ELENTISQLE NYENEAKASQ FVLEHLKFTN ESLKIQRDEA
210 220 230 240 250
QICLIGLCNK FGLQCEIDNS IHVTESDKKG KRKGRKNRRI EVSFGAPGHD
260
LTEQISTLSD VE
Length:262
Mass (Da):30,118
Last modified:November 23, 2004 - v1
Checksum:iFEDBE1C8FB767C6C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY632081 Genomic RNA. Translation: AAU88190.1.
DQ113904 Genomic RNA. Translation: AAZ03492.1.
RefSeqiYP_392497.1. NC_007555.1.

Genome annotation databases

GeneIDi5076657.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY632081 Genomic RNA. Translation: AAU88190.1.
DQ113904 Genomic RNA. Translation: AAZ03492.1.
RefSeqiYP_392497.1. NC_007555.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5076657.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Cloning and sequence analysis of dsRNA segments 5, 6 and 7 of a novel non-group A, B, C adult rotavirus that caused an outbreak of gastroenteritis in China."
    Yang H., Makeyev E.V., Kang Z., Ji S., Bamford D.H., van Dijk A.A.
    Virus Res. 106:15-26(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
  2. "Molecular characterization of a novel adult diarrhoea rotavirus strain J19 isolated in China and its significance for the evolution and origin of group B rotaviruses."
    Jiang S., Ji S., Tang Q., Cui X., Yang H., Kan B., Gao S.
    J. Gen. Virol. 89:2622-2629(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNSP3_ROTJ1
AccessioniPrimary (citable) accession number: Q5Y9A9
Secondary accession number(s): Q45UF3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: November 23, 2004
Last modified: January 7, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.