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Q5Y9A9 (NSP3_ROTJ1) Reviewed, UniProtKB/Swiss-Prot

Last modified September 18, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein attributes

Sequence length262 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the rotavirus B NSP3 family.

Ontologies

Keywords
   DomainCoiled coil
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 262262Non-structural protein 3
PRO_0000369850

Regions

Coiled coil137 – 18751 Potential

Sequences

Sequence LengthMass (Da)Tools
Q5Y9A9 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: FEDBE1C8FB767C6C

FASTA26230,118
        10         20         30         40         50         60 
MAELVCDALA TLTRNTYGDN DESAKFCRMF RTMIRDSGLY GNIENWRAAF YRERLPKRMS 

        70         80         90        100        110        120 
HSTVSIQLDN LEREVLKIRA EGFCQGYTRK ERTLNAFDLS DDGKGNTIIK PTTHLSSIIL 

       130        140        150        160        170        180 
QNSYNSAFKL PKIPDGLLEK TRYELEEEKK NNDILKQKIK ELENTISQLE NYENEAKASQ 

       190        200        210        220        230        240 
FVLEHLKFTN ESLKIQRDEA QICLIGLCNK FGLQCEIDNS IHVTESDKKG KRKGRKNRRI 

       250        260 
EVSFGAPGHD LTEQISTLSD VE 

« Hide

References

[1]"Cloning and sequence analysis of dsRNA segments 5, 6 and 7 of a novel non-group A, B, C adult rotavirus that caused an outbreak of gastroenteritis in China."
Yang H., Makeyev E.V., Kang Z., Ji S., Bamford D.H., van Dijk A.A.
Virus Res. 106:15-26(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
[2]"Molecular characterization of a novel adult diarrhoea rotavirus strain J19 isolated in China and its significance for the evolution and origin of group B rotaviruses."
Jiang S., Ji S., Tang Q., Cui X., Yang H., Kan B., Gao S.
J. Gen. Virol. 89:2622-2629(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY632081 Genomic RNA. Translation: AAU88190.1.
DQ113904 Genomic RNA. Translation: AAZ03492.1.
RefSeqYP_392497.1. NC_007555.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5076657.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameNSP3_ROTJ1
AccessionPrimary (citable) accession number: Q5Y9A9
Secondary accession number(s): Q45UF3
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: November 23, 2004
Last modified: September 18, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families