Q5XJ92 (Q5XJ92_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Peroxisome biogenesis factor 10 EMBL AAH83412.1

Submitted name:
Uncharacterized protein Ensembl ENSDARP00000060852

Gene names

Name:

pex10 Ensembl ENSDARP00000060852 ZFIN ZDB-GENE-041010-71

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) [Reference proteome]

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	318 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Domain	Zinc-finger RuleBase RU000353
Ligand	Metal-binding Zinc
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	protein import into peroxisome matrix Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to peroxisomal membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5XJ92 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: DAA650DCEB90AE2F	FASTA	318	37,312
	10 20 30 40 50 60 MPLVPANQPQ LIRSCQKDEY YQNNLTNNAN ELFHTFAGSR RWLQWRKEIE LLSDLTYYIL 70 80 90 100 110 120 TTLSGYQTLG EEYVSIIQVD PSKRRIPSRI RRTALICFHT FVPYLLDKVL ICVENELEAE 130 140 150 160 170 180 APQNTRRTWN PLSHMRFWIQ RAVGLLTESQ RKSLIPLVFA LQQGITLLYR LHVALFYTTG 190 200 210 220 230 240 AFYHIAKRAA GVRYLRVGNA SGDDPRISHS YRLLGGLSVL QLAITLTLQF NNLRQRQRAR 250 260 270 280 290 300 HEWKQHRNLL PSHQVSQSSS RTSRCILCLE ERRNTTSTPC GHLFCWECIT EWCNTKNECP 310 LCREKFQPHR LVYLRSYK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Ovary EMBL AAH83412.1.
[2]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000060852.
[3]	Ensembl Submitted (FEB-2012) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000060852.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU570796 Genomic DNA. No translation available. BC083412 mRNA. Translation: AAH83412.1.
IPI	IPI00504298.
RefSeq	NP_001005994.1. NM_001005994.1.
UniGene	Dr.91787.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	7955.ENSDARP00000060852.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000060853; ENSDARP00000060852; ENSDARG00000041511.
GeneID	449821.
KEGG	dre:449821.
Organism-specific databases
CTD	5192.
ZFIN	ZDB-GENE-041010-71. pex10.
Phylogenomic databases
eggNOG	COG5574.
GeneTree	ENSGT00510000048446.
HOGENOM	HOG000180194.
HOVERGEN	HBG053568.
InParanoid	Q5XJ92.
KO	K13346.
OMA	FRQRQRA.
OrthoDB	EOG4TB4C1.
Family and domain databases
Gene3D	3.30.40.10. 1 hit.
InterPro	IPR025654. PEX10. IPR006845. Pex_N. IPR001841. Znf_RING. IPR013083. Znf_RING/FYVE/PHD. IPR017907. Znf_RING_CS. [Graphical view]
PANTHER	PTHR23350. PTHR23350. 1 hit.
Pfam	PF04757. Pex2_Pex12. 1 hit. [Graphical view]
SMART	SM00184. RING. 1 hit. [Graphical view]
PROSITE	PS00518. ZF_RING_1. 1 hit. PS50089. ZF_RING_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20832893.

Entry information

Entry name

Q5XJ92_DANRE

Accession

Primary (citable) accession number: Q5XJ92

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	April 3, 2013
This is version 74 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)