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Protein

Protein FAM46C

Gene

Fam46c

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM46C
Gene namesi
Name:Fam46c
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1359446. Fam46c.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002599361 – 391Protein FAM46CAdd BLAST391

Proteomic databases

PaxDbiQ5XIV0.
PRIDEiQ5XIV0.

PTM databases

PhosphoSitePlusiQ5XIV0.

Expressioni

Gene expression databases

BgeeiENSRNOG00000015222.
GenevisibleiQ5XIV0. RN.

Interactioni

Protein-protein interaction databases

IntActiQ5XIV0. 1 interactor.
STRINGi10116.ENSRNOP00000020401.

Family & Domainsi

Sequence similaritiesi

Belongs to the FAM46 family.Curated

Phylogenomic databases

eggNOGiKOG3852. Eukaryota.
ENOG410XTG4. LUCA.
GeneTreeiENSGT00500000044785.
HOGENOMiHOG000234733.
HOVERGENiHBG057969.
InParanoidiQ5XIV0.
OMAiFFYDCSS.
OrthoDBiEOG091G06T9.
PhylomeDBiQ5XIV0.
TreeFamiTF315239.

Family and domain databases

InterProiIPR012937. DUF1693.
[Graphical view]
PfamiPF07984. NTP_transf_7. 1 hit.
[Graphical view]
SMARTiSM01153. DUF1693. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5XIV0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADEGSSTKD SESFSVLNWD QVSRLHEVLT EVVPIHGRGN FPTLEITLKD
60 70 80 90 100
IVQTVRSRLE EAGIKVQDVR LNGSAAGHVL VKDNGLGCKD LDLIFHVALP
110 120 130 140 150
TEAEFQLVRD VVLCSLLNFL PEGVNKLKIS PVTLKEAYVQ KLVKVCTDTD
160 170 180 190 200
RWSLISLSNK NGRNVELKFV DSIRRQFEFS VDSFQIILDS LLFFYDCSSN
210 220 230 240 250
PVSEHFHPTV VGESMYGDFE EAFDHLQNRL IATKNPEEIR GGGLLKYSNL
260 270 280 290 300
LVRDFRPADQ EEIKTLERYM CSRFFIDFPD ILEQQRKLET YLQNHFADEE
310 320 330 340 350
RSKYDYLMIL RRVVNESTVC LMGHERRQTL NLISLLALRV LAEQNIIPSA
360 370 380 390
TNVTCYYQPA PYVSDGNFNN YYIAHPPVTY SQPYPTWLPC N
Length:391
Mass (Da):44,799
Last modified:November 23, 2004 - v1
Checksum:iEDEC539DF06DF8AD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC083570 mRNA. Translation: AAH83570.1.
RefSeqiNP_001014063.1. NM_001014041.1.
XP_006233100.1. XM_006233038.3.
UniGeneiRn.162620.

Genome annotation databases

EnsembliENSRNOT00000020401; ENSRNOP00000020401; ENSRNOG00000015222.
GeneIDi310721.
KEGGirno:310721.
UCSCiRGD:1359446. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC083570 mRNA. Translation: AAH83570.1.
RefSeqiNP_001014063.1. NM_001014041.1.
XP_006233100.1. XM_006233038.3.
UniGeneiRn.162620.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ5XIV0. 1 interactor.
STRINGi10116.ENSRNOP00000020401.

PTM databases

PhosphoSitePlusiQ5XIV0.

Proteomic databases

PaxDbiQ5XIV0.
PRIDEiQ5XIV0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000020401; ENSRNOP00000020401; ENSRNOG00000015222.
GeneIDi310721.
KEGGirno:310721.
UCSCiRGD:1359446. rat.

Organism-specific databases

CTDi54855.
RGDi1359446. Fam46c.

Phylogenomic databases

eggNOGiKOG3852. Eukaryota.
ENOG410XTG4. LUCA.
GeneTreeiENSGT00500000044785.
HOGENOMiHOG000234733.
HOVERGENiHBG057969.
InParanoidiQ5XIV0.
OMAiFFYDCSS.
OrthoDBiEOG091G06T9.
PhylomeDBiQ5XIV0.
TreeFamiTF315239.

Miscellaneous databases

PROiQ5XIV0.

Gene expression databases

BgeeiENSRNOG00000015222.
GenevisibleiQ5XIV0. RN.

Family and domain databases

InterProiIPR012937. DUF1693.
[Graphical view]
PfamiPF07984. NTP_transf_7. 1 hit.
[Graphical view]
SMARTiSM01153. DUF1693. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiFA46C_RAT
AccessioniPrimary (citable) accession number: Q5XIV0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: November 23, 2004
Last modified: November 2, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.