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Protein
Submitted name:

Zinc finger and BTB domain-containing 17

Gene

Zbtb17

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger and BTB domain-containing 17Imported
Gene namesi
Name:Zbtb17Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi1307143 Zbtb17

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000010436

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000014399

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 86BTBInterPro annotationAdd BLAST63
Domaini304 – 331C2H2-typeInterPro annotationAdd BLAST28
Domaini332 – 359C2H2-typeInterPro annotationAdd BLAST28
Domaini360 – 387C2H2-typeInterPro annotationAdd BLAST28
Domaini388 – 415C2H2-typeInterPro annotationAdd BLAST28
Domaini416 – 443C2H2-typeInterPro annotationAdd BLAST28
Domaini444 – 471C2H2-typeInterPro annotationAdd BLAST28
Domaini472 – 499C2H2-typeInterPro annotationAdd BLAST28
Domaini500 – 527C2H2-typeInterPro annotationAdd BLAST28
Domaini528 – 555C2H2-typeInterPro annotationAdd BLAST28
Domaini556 – 583C2H2-typeInterPro annotationAdd BLAST28
Domaini584 – 611C2H2-typeInterPro annotationAdd BLAST28
Domaini612 – 640C2H2-typeInterPro annotationAdd BLAST29
Domaini715 – 742C2H2-typeInterPro annotationAdd BLAST28

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili687 – 707Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00910000144063
HOGENOMiHOG000231298
HOVERGENiHBG054919
KOiK10500
OMAiAGFLQMQ
TreeFamiTF332047

Family and domain databases

InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00651 BTB, 1 hit
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 13 hits
SUPFAMiSSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 9 hits
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 13 hits
PS50157 ZINC_FINGER_C2H2_2, 13 hits

Sequencei

Sequence statusi: Complete.

Q5XIU3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFPQHSQRV LEQLNQQRQM GLLCDCTFVV DGVDFKAHKA VLAACSEYFK
60 70 80 90 100
MLFVDQKDVV HLDISNAAGL GQVLEFMYTA KLHLSPENVD DVLAVASFLQ
110 120 130 140 150
MQDIITACHT LKSLAEPTST TGESADASAE EVCCVLSPGG DKRAKEEKAA
160 170 180 190 200
ATVLSRLDQA RSSSSAGPGR ELKEEWGGQA ESASRGAEQT EKADAPREPP
210 220 230 240 250
PVELKPDPTS SMAAAEAEAL SESSEQEMEV EPASKGEEGQ EEEGPGPATV
260 270 280 290 300
KEEGVHLENG EPPEENEESA GTDSGHELGM EGQNLRSGTY GDRTESKAYG
310 320 330 340 350
SIIHKCEDCG KEFTHTGNFK RHIRIHTGEK PFSCRECSKA FSDPAACKAH
360 370 380 390 400
EKTHSPLKPY GCEECGKSYR LISLLNLHKK RHSGEARYRC GDCGKLFTTS
410 420 430 440 450
GNLKRHQLVH SGQKPYQCDY CGRSFSDPTS KMRHLETHDT DKEHKCPHCD
460 470 480 490 500
KKFNQVGNLK AHLKIHIADG PLKCRECGKQ FTTSGNLKRH LRIHSGEKPY
510 520 530 540 550
VCTHCQRQFA DPGALQRHVR IHTGEKPCQC VICGKAFTQA SSLIAHVRQH
560 570 580 590 600
TGEKPYVCER CGKRFVQSSQ LANHIRHHDN IRPHKCSVCS KAFVNVGDLS
610 620 630 640 650
KHIIIHTGEK PYLCDKCGRG FNRVDNLRSH VKTVHQGKAG IKILEPEEGG
660 670 680 690 700
EVSVVTVDDM VTLATEALAA TAVTQLTVVP VGAAVTADET EVLKAEISKA
710 720 730 740 750
VKQVQEEDPN THILYACDSC GDKFLDANSL AQHVRIHTAQ ALVMFQTDAD
760 770 780 790 800
FYQQYGPGGA WPAGQMLQAG ELVFRPRDGT EGQPTLAETP PTAPDCLPPA

E
Length:801
Mass (Da):87,652
Last modified:November 23, 2004 - v1
Checksum:i774434964EE3E11F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120594 Genomic DNA No translation available.
BC083577 mRNA Translation: AAH83577.1
RefSeqiNP_001012105.1, NM_001012105.1
UniGeneiRn.15582

Genome annotation databases

EnsembliENSRNOT00000014399; ENSRNOP00000014399; ENSRNOG00000010436
ENSRNOT00000088644; ENSRNOP00000071596; ENSRNOG00000010436
GeneIDi313666
KEGGirno:313666

Similar proteinsi

Entry informationi

Entry nameiQ5XIU3_RAT
AccessioniPrimary (citable) accession number: Q5XIU3
Entry historyiIntegrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: May 23, 2018
This is version 131 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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