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Q5XIT0

- CDKL2_RAT

UniProt

Q5XIT0 - CDKL2_RAT

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Protein
Cyclin-dependent kinase-like 2
Gene
Cdkl2
Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei33 – 331ATP By similarity
Active sitei126 – 1261Proton acceptor By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi10 – 189ATP By similarity

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. cyclin-dependent protein serine/threonine kinase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Serine/threonine-protein kinase, Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Cyclin-dependent kinase-like 2 (EC:2.7.11.22)
Gene namesi
Name:Cdkl2
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 14

Organism-specific databases

RGDi1309625. Cdkl2.

Subcellular locationi

Cytoplasm By similarity. Nucleus By similarity

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
  2. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 507507Cyclin-dependent kinase-like 2
PRO_0000085819Add
BLAST

Proteomic databases

PaxDbiQ5XIT0.
PRIDEiQ5XIT0.

PTM databases

PhosphoSiteiQ5XIT0.

Expressioni

Gene expression databases

GenevestigatoriQ5XIT0.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000045371.

Structurei

3D structure databases

ProteinModelPortaliQ5XIT0.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini4 – 289286Protein kinase
Add
BLAST

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi45 – 517[NKR]KIAxRE

Domaini

The [NKR]KIAxRE motif seems to be a cyclin-binding region.

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0515.
GeneTreeiENSGT00650000093115.
HOGENOMiHOG000233024.
HOVERGENiHBG080204.
KOiK08824.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR002290. Ser/Thr_dual-sp_kinase_dom.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view]
PfamiPF00069. Pkinase. 1 hit.
[Graphical view]
SMARTiSM00220. S_TKc. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiPS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5XIT0-1 [UniParc]FASTAAdd to Basket

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MEKYENLGLV GEGSYGMVMK CRNKDSGRIV AIKKFLESDD DKMVKKIAMR    50
EIKLLKQLRH ENLVNLLEVC KKKKRWYLVF EFVDHTILDD LKLFPNGLDY 100
QVVQKYLFQI INGIGFCHSH NIIHRDIKPE NILVSQSGVV KLCDFGFART 150
LAAPGEVYTD YVATRWYRAP ELLVGDVKYG KAVDIWAIGC LVIEMLMGQP 200
LFPGESDIDQ LHHIMTCLGN LIPRHQELFY KNPVFAGVRL PEIKDIEAEP 250
LESRYPKLPE VVISLAKKCL HIDPDKRPLC ADLLHHDFFQ MDGFAERFSQ 300
ELQLKIEKDA RNNSLPKKFQ IRKKEKDDAL GEERKTLVVQ DTNADPKTKD 350
SKVLKVKGSK IDVEKTEKGT RASNGSCLHD NGTSHKGLSS TSLRDCSNVT 400
IDHPRNPGTA IPPLTHNLSA VAPGINAAMG TIPGVQNYRV DEKTKKYCNP 450
FVKPSQPSPS GIYNMNVSAS VSNCPLPRKS KHSPPLDLAV SMGARRVKLY 500
LETESET 507
Length:507
Mass (Da):57,135
Last modified:November 23, 2004 - v1
Checksum:i576D9A4F45A01B81
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC083590 mRNA. Translation: AAH83590.1.
RefSeqiNP_001012035.1. NM_001012035.1.
UniGeneiRn.162244.

Genome annotation databases

EnsembliENSRNOT00000050038; ENSRNOP00000049130; ENSRNOG00000002506.
GeneIDi305242.
KEGGirno:305242.
UCSCiRGD:1309625. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC083590 mRNA. Translation: AAH83590.1 .
RefSeqi NP_001012035.1. NM_001012035.1.
UniGenei Rn.162244.

3D structure databases

ProteinModelPortali Q5XIT0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000045371.

PTM databases

PhosphoSitei Q5XIT0.

Proteomic databases

PaxDbi Q5XIT0.
PRIDEi Q5XIT0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000050038 ; ENSRNOP00000049130 ; ENSRNOG00000002506 .
GeneIDi 305242.
KEGGi rno:305242.
UCSCi RGD:1309625. rat.

Organism-specific databases

CTDi 8999.
RGDi 1309625. Cdkl2.

Phylogenomic databases

eggNOGi COG0515.
GeneTreei ENSGT00650000093115.
HOGENOMi HOG000233024.
HOVERGENi HBG080204.
KOi K08824.

Miscellaneous databases

NextBioi 654245.
PROi Q5XIT0.

Gene expression databases

Genevestigatori Q5XIT0.

Family and domain databases

InterProi IPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR002290. Ser/Thr_dual-sp_kinase_dom.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view ]
Pfami PF00069. Pkinase. 1 hit.
[Graphical view ]
SMARTi SM00220. S_TKc. 1 hit.
[Graphical view ]
SUPFAMi SSF56112. SSF56112. 1 hit.
PROSITEi PS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.

Entry informationi

Entry nameiCDKL2_RAT
AccessioniPrimary (citable) accession number: Q5XIT0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 23, 2004
Last modified: April 16, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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