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Protein

Solute carrier family 25 member 34

Gene

Slc25a34

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransport

Names & Taxonomyi

Protein namesi
Recommended name:
Solute carrier family 25 member 34
Gene namesi
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi1359157. Slc25a34.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei21 – 41Helical; Name=1Sequence analysisAdd BLAST21
Transmembranei59 – 79Helical; Name=2Sequence analysisAdd BLAST21
Transmembranei112 – 134Helical; Name=3Sequence analysisAdd BLAST23
Transmembranei184 – 205Helical; Name=4Sequence analysisAdd BLAST22
Transmembranei220 – 240Helical; Name=5Sequence analysisAdd BLAST21
Transmembranei292 – 315Helical; Name=6Sequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane, Mitochondrion, Mitochondrion inner membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002917911 – 318Solute carrier family 25 member 34Add BLAST318

Proteomic databases

PaxDbiQ5XIF9.
PRIDEiQ5XIF9.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000022820.

Structurei

3D structure databases

ProteinModelPortaliQ5XIF9.
SMRiQ5XIF9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati18 – 111Solcar 1Add BLAST94
Repeati115 – 208Solcar 2Add BLAST94
Repeati218 – 309Solcar 3Add BLAST92

Sequence similaritiesi

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0755. Eukaryota.
ENOG410XS37. LUCA.
HOGENOMiHOG000165141.
HOVERGENiHBG108440.
InParanoidiQ5XIF9.
KOiK15117.
OrthoDBiEOG091G0MCY.
PhylomeDBiQ5XIF9.
TreeFamiTF324506.

Family and domain databases

Gene3Di1.50.40.10. 1 hit.
InterProiView protein in InterPro
IPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom.
PfamiView protein in Pfam
PF00153. Mito_carr. 3 hits.
SUPFAMiSSF103506. SSF103506. 1 hit.
PROSITEiView protein in PROSITE
PS50920. SOLCAR. 3 hits.

Sequencei

Sequence statusi: Complete.

Q5XIF9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLTQAQMAP ATDSREMVSP AVDLVLGASA CCLACVFTNP LEVVKTRLQL
60 70 80 90 100
QGELQAPGTY PRPYRGFVSS VTAVARADGL WGLQKGLAAG LLYQGLMNGV
110 120 130 140 150
RFYCYSLACQ AGLTQQPGGT VVAGAVAGAL GAFVGSPAYL VKTQLQAQTG
160 170 180 190 200
AAVAVGHQHQ HQGVLSALET IWRQQGMLGL WRGVGAAVPR VTVGSAAQLA
210 220 230 240 250
TFTSAKAWVQ DQQWFLEDSW LATLAGGMIS SIAVVAVMAP FDVVSTRLYN
260 270 280 290 300
QPVDRAGRGQ LYGGLTDCLV KTCQQEGPLA LYKGVGPAYL RLGPHTILSM
310
FFWDELRKLA LRAQHPGT
Length:318
Mass (Da):33,652
Last modified:June 26, 2007 - v2
Checksum:i4C493217FCCDB3F9
GO

Sequence cautioni

The sequence AAH83723 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC083723 mRNA. Translation: AAH83723.1. Different initiation.
RefSeqiNP_001013958.2. NM_001013936.2.
UniGeneiRn.104973.
Rn.222539.

Genome annotation databases

GeneIDi298606.
KEGGirno:298606.

Similar proteinsi

Entry informationi

Entry nameiS2534_RAT
AccessioniPrimary (citable) accession number: Q5XIF9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: June 26, 2007
Last modified: August 30, 2017
This is version 86 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families