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Protein
Submitted name:

Protein Rchy1

Gene

Rchy1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • receptor binding Source: RGD
  • ubiquitin-protein transferase activity Source: Ensembl
  • zinc ion binding Source: Ensembl

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-RNO-110320. Translesion Synthesis by POLH.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Rchy1Imported
Submitted name:
Ring finger and CHY zinc finger domain containing 1Imported
Submitted name:
Ring finger and CHY zinc finger domain containing 1, isoform CRA_bImported
Gene namesi
Name:Rchy1Imported
ORF Names:rCG_60425Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 14

Organism-specific databases

RGDi1359180. Rchy1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSRNOG00000002546.

Interactioni

GO - Molecular functioni

  • receptor binding Source: RGD

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000003470.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 80CHY-typeInterPro annotationAdd BLAST68
Domaini82 – 144CTCHY-typeInterPro annotationAdd BLAST63
Domaini145 – 186RING-typeInterPro annotationAdd BLAST42

Phylogenomic databases

eggNOGiKOG1940. Eukaryota.
ENOG410XXHF. LUCA.
GeneTreeiENSGT00390000008853.
HOGENOMiHOG000231827.
HOVERGENiHBG062959.
KOiK10144.
OMAiCGSYNTA.
OrthoDBiEOG091G094U.
TreeFamiTF323762.

Family and domain databases

Gene3Di2.20.28.10. 1 hit.
3.30.40.10. 1 hit.
InterProiIPR004039. Rubredoxin-type_fold.
IPR008913. Znf_CHY.
IPR017921. Znf_CTCHY.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF05495. zf-CHY. 1 hit.
PF13639. zf-RING_2. 1 hit.
[Graphical view]
SMARTiSM00184. RING. 1 hit.
[Graphical view]
PROSITEiPS51266. ZF_CHY. 1 hit.
PS51270. ZF_CTCHY. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5XIE4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAATAQEDGV RSPAPGPRGC EHYDRACLLK APCCDKLYTC RLCHDTHEDH
60 70 80 90 100
QLDRFKVKEV QCINCEKLQH AQQTCEDCST LFGEYYCSIC HLFDKDKKQY
110 120 130 140 150
HCESCGICRI GPKEDFFHCL KCNLCLAMTL RGKHKCIENV SRQNCPICLE
160 170 180 190 200
DIHTSRVVAH VLPCGHLLHR TCYEEMLKEG YRCPLCMHSA LDMTRYWRQL
210 220 230 240 250
DIEVAQTPMP SEYQNVTVDI LCNDCNGRST VQFHILGMKC KLCDSYNTAQ
260
AGGRTVSMDE Q
Length:261
Mass (Da):29,874
Last modified:November 23, 2004 - v1
Checksum:i513A1E88A315C0FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC136013 Genomic DNA. No translation available.
BC083739 mRNA. Translation: AAH83739.1.
CH474060 Genomic DNA. Translation: EDL88591.1.
RefSeqiNP_001007619.1. NM_001007618.1.
UniGeneiRn.2007.

Genome annotation databases

EnsembliENSRNOT00000003470; ENSRNOP00000003470; ENSRNOG00000002546.
GeneIDi289508.
KEGGirno:289508.
UCSCiRGD:1359180. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC136013 Genomic DNA. No translation available.
BC083739 mRNA. Translation: AAH83739.1.
CH474060 Genomic DNA. Translation: EDL88591.1.
RefSeqiNP_001007619.1. NM_001007618.1.
UniGeneiRn.2007.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000003470.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000003470; ENSRNOP00000003470; ENSRNOG00000002546.
GeneIDi289508.
KEGGirno:289508.
UCSCiRGD:1359180. rat.

Organism-specific databases

CTDi25898.
RGDi1359180. Rchy1.

Phylogenomic databases

eggNOGiKOG1940. Eukaryota.
ENOG410XXHF. LUCA.
GeneTreeiENSGT00390000008853.
HOGENOMiHOG000231827.
HOVERGENiHBG062959.
KOiK10144.
OMAiCGSYNTA.
OrthoDBiEOG091G094U.
TreeFamiTF323762.

Enzyme and pathway databases

ReactomeiR-RNO-110320. Translesion Synthesis by POLH.

Gene expression databases

BgeeiENSRNOG00000002546.

Family and domain databases

Gene3Di2.20.28.10. 1 hit.
3.30.40.10. 1 hit.
InterProiIPR004039. Rubredoxin-type_fold.
IPR008913. Znf_CHY.
IPR017921. Znf_CTCHY.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF05495. zf-CHY. 1 hit.
PF13639. zf-RING_2. 1 hit.
[Graphical view]
SMARTiSM00184. RING. 1 hit.
[Graphical view]
PROSITEiPS51266. ZF_CHY. 1 hit.
PS51270. ZF_CTCHY. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5XIE4_RAT
AccessioniPrimary (citable) accession number: Q5XIE4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: November 30, 2016
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.