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Protein

39S ribosomal protein L11, mitochondrial

Gene

Mrpl11

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-5389840. Mitochondrial translation elongation.
R-RNO-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L11, mitochondrial
Short name:
L11mt
Short name:
MRP-L11
Gene namesi
Name:Mrpl11
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1359665. mrpl11.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 20339S ribosomal protein L11, mitochondrialPRO_0000236250
Transit peptidei1 – ?MitochondrionSequence analysis

Proteomic databases

PaxDbiQ5XIE3.
PRIDEiQ5XIE3.

PTM databases

iPTMnetiQ5XIE3.

Expressioni

Gene expression databases

ExpressionAtlasiQ5XIE3. baseline.
GenevisibleiQ5XIE3. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000027091.

Structurei

3D structure databases

ProteinModelPortaliQ5XIE3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L11P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3257. Eukaryota.
COG0080. LUCA.
GeneTreeiENSGT00390000003153.
HOGENOMiHOG000082123.
HOVERGENiHBG036110.
InParanoidiQ5XIE3.
KOiK02867.
OMAiTYDLKIG.
OrthoDBiEOG7HHWTP.
PhylomeDBiQ5XIE3.
TreeFamiTF313471.

Family and domain databases

Gene3Di1.10.10.250. 1 hit.
3.30.1550.10. 1 hit.
HAMAPiMF_00736. Ribosomal_L11.
InterProiIPR000911. Ribosomal_L11/L12.
IPR006519. Ribosomal_L11_bac-typ.
IPR020783. Ribosomal_L11_C.
IPR020784. Ribosomal_L11_N.
[Graphical view]
PANTHERiPTHR11661. PTHR11661. 1 hit.
PfamiPF00298. Ribosomal_L11. 1 hit.
PF03946. Ribosomal_L11_N. 1 hit.
[Graphical view]
SMARTiSM00649. RL11. 1 hit.
[Graphical view]
SUPFAMiSSF46906. SSF46906. 1 hit.
SSF54747. SSF54747. 1 hit.
TIGRFAMsiTIGR01632. L11_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5XIE3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKLSRVTRT LKKPEAGGVI RSIVRAGQAI PGPPLGPILG QRGVSINQFC
60 70 80 90 100
KEFNEKTKDI KEGIPLPTKI FIKPDRTFEL KIGQPTISYF LKAAAGIEKG
110 120 130 140 150
ARQTGKEVAG LVSLKHVYEI ARVKAKDEAF AMQDVPLSSI VRSIIGSARS
160 170 180 190 200
LGIRVVKDLS VDELAAFQKE RAVFLAAQKR RIWQLRQKLP KSDPNLLHSE

VRD
Length:203
Mass (Da):22,420
Last modified:November 23, 2004 - v1
Checksum:iD1000FDD09E4A072
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC083740 mRNA. Translation: AAH83740.1.
RefSeqiNP_001006974.1. NM_001006973.1.
UniGeneiRn.3762.

Genome annotation databases

EnsembliENSRNOT00000027091; ENSRNOP00000027091; ENSRNOG00000019970.
GeneIDi293666.
KEGGirno:293666.
UCSCiRGD:1359665. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC083740 mRNA. Translation: AAH83740.1.
RefSeqiNP_001006974.1. NM_001006973.1.
UniGeneiRn.3762.

3D structure databases

ProteinModelPortaliQ5XIE3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000027091.

PTM databases

iPTMnetiQ5XIE3.

Proteomic databases

PaxDbiQ5XIE3.
PRIDEiQ5XIE3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000027091; ENSRNOP00000027091; ENSRNOG00000019970.
GeneIDi293666.
KEGGirno:293666.
UCSCiRGD:1359665. rat.

Organism-specific databases

CTDi65003.
RGDi1359665. mrpl11.

Phylogenomic databases

eggNOGiKOG3257. Eukaryota.
COG0080. LUCA.
GeneTreeiENSGT00390000003153.
HOGENOMiHOG000082123.
HOVERGENiHBG036110.
InParanoidiQ5XIE3.
KOiK02867.
OMAiTYDLKIG.
OrthoDBiEOG7HHWTP.
PhylomeDBiQ5XIE3.
TreeFamiTF313471.

Enzyme and pathway databases

ReactomeiR-RNO-5389840. Mitochondrial translation elongation.
R-RNO-5419276. Mitochondrial translation termination.

Miscellaneous databases

NextBioi636676.
PROiQ5XIE3.

Gene expression databases

ExpressionAtlasiQ5XIE3. baseline.
GenevisibleiQ5XIE3. RN.

Family and domain databases

Gene3Di1.10.10.250. 1 hit.
3.30.1550.10. 1 hit.
HAMAPiMF_00736. Ribosomal_L11.
InterProiIPR000911. Ribosomal_L11/L12.
IPR006519. Ribosomal_L11_bac-typ.
IPR020783. Ribosomal_L11_C.
IPR020784. Ribosomal_L11_N.
[Graphical view]
PANTHERiPTHR11661. PTHR11661. 1 hit.
PfamiPF00298. Ribosomal_L11. 1 hit.
PF03946. Ribosomal_L11_N. 1 hit.
[Graphical view]
SMARTiSM00649. RL11. 1 hit.
[Graphical view]
SUPFAMiSSF46906. SSF46906. 1 hit.
SSF54747. SSF54747. 1 hit.
TIGRFAMsiTIGR01632. L11_bact. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Heart.

Entry informationi

Entry nameiRM11_RAT
AccessioniPrimary (citable) accession number: Q5XIE3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: November 23, 2004
Last modified: May 11, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.