Unreviewed, UniProtKB/TrEMBL Q5XI34 (Q5XI34_RAT)

Names and origin

Protein names

Submitted name:
    Protein phosphatase 2 (Formerly 2A), regulatory subunit A, alpha isoform EMBL AAH83859.1
Submitted name:
    Protein phosphatase 2 (Formerly 2A), regulatory subunit A (PR 65), alpha isoform, isoform CRA_a EMBL EDL99781.1

Gene names

Name:	Ppp2r1a RGD 620907
ORF Names:	rCG_22961 EMBL EDL99781.1

Organism

Rattus norvegicus (Rat) EMBL AAH83859.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	589 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Cellular component	cytosol Inferred from electronic annotation. Source: Compara protein phosphatase type 2A complex Inferred from electronic annotation. Source: Compara
Molecular function	protein binding Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5XI34-1 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 5175409E4D50A366	FASTA	589	65,323
	10 20 30 40 50 60 MAAADGDDSL YPIAVLIDEL RNEDVQLRLN SIKKLSTIAL ALGVERTRSE LLPFLTDTIY 70 80 90 100 110 120 DEDEVLLALA EQLGTFTTLV GGPEYVHCLL PPLESLATVE ETVVRDKAVE SLRAISHEHS 130 140 150 160 170 180 PSDLEAHFVP LVKRLAGGDW FTSRTSACGL FSVCYPRVSS AVKAELRQYF RNLCSDDTPM 190 200 210 220 230 240 VRRAAASKLG EFAKVLELDN VKSEIIPMFS NLASDEQDSV RLLAVEACVN IAQLLPQEDL 250 260 270 280 290 300 EALVMPTLRQ AAEDKSWRVR YMVADKFTEL QKAVGPEITK TDLVPAFQNL MKDCEAEVRA 310 320 330 340 350 360 AASHKVKEFC ENLSADCREN VIMTQILPCI KELVSDANQH VKSALASVIM GLSPILGKDN 370 380 390 400 410 420 TIEHLLPLFL AQLKDECPEV RLNIISNLDC VNEVIGIRQL SQSLLPAIVE LAEDAKWRVR 430 440 450 460 470 480 LAIIEYMPLL AGQLGVEFFD EKLNSLCMAW LVDHVYAIRE AATSNLKKLV EKFGKEWAHA 490 500 510 520 530 540 TIIPKVLAMS GDPNYLHRMT TLFCINVLSE VCGQDITTKH MLPTVLRMAG DPVANVRFNV 550 560 570 580 AKSLQKIGPI LDNSTLQSEV KPILEKLTQD QDVDVKYFAQ EALTVLSLA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Kidney EMBL AAH83859.1.
[2]	"Gene and alternative splicing annotation with AIR." Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M., Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z., Istrail S., Li P., Sutton G. Genome Res. 15:54-66(2005) [PubMed: 15632090] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: BN EMBL EDL99781.1.
[3]	Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M., Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L., Lu F. , Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: BN EMBL EDL99781.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BC083859 mRNA. Translation: AAH83859.1. CH474033 Genomic DNA. Translation: EDL99781.1.
IPI	IPI00365423.
RefSeq	NP_476481.1.
UniGene	Rn.4108
3D structure databases
SMR	Q5XI34. Positions 2-589.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5XI34.
Proteomic databases
PRIDE	Q5XI34.
Genome annotation databases
Ensembl	ENSRNOT00000015019; ENSRNOP00000015019; ENSRNOG00000011282; Rattus norvegicus. [Genome view]
GeneID	117281.
KEGG	rno:117281.
UCSC	NM_057140. rat.
Organism-specific databases
CTD	117281.
Phylogenomic databases
HOVERGEN	Q5XI34.
OMA	SKWRVRL.
Gene expression databases
ArrayExpress	Q5XI34.
Genevestigator	Q5XI34.
Family and domain databases
InterPro	IPR011989. ARM-like. IPR016024. ARM-type_fold. IPR000357. HEAT. [Graphical view]
Gene3D	G3DSA:1.25.10.10. ARM-like. 1 hit.
Pfam	PF02985. HEAT. 11 hits. [Graphical view]
PROSITE	PS50077. HEAT_REPEAT. 11 hits. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	620235.

Entry information

Entry name

Q5XI34_RAT

Accession

Primary (citable) accession number: Q5XI34

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	November 3, 2009
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)