Q5XI22 (THIC_RAT) Reviewed, UniProtKB/Swiss-Prot
Last modified
November 16, 2011.
Version 63.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Acetyl-CoA acetyltransferase, cytosolic EC=2.3.1.9 Alternative name(s): Cytosolic acetoacetyl-CoA thiolase | ||
| Gene names |
| ||
| Organism | Rattus norvegicus (Rat) | ||
| Taxonomic identifier | 10116 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus |
Protein attributes
| Sequence length | 397 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Catalytic activity | 2 acetyl-CoA = CoA + acetoacetyl-CoA. |
| Subunit structure | Homotetramer By similarity. |
| Subcellular location | Cytoplasm By similarity. |
| Sequence similarities | Belongs to the thiolase family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm |
| Molecular function | Acyltransferase Transferase |
| PTM | Acetylation |
| Technical term | Complete proteome Direct protein sequencing Reference proteome |
| Gene Ontology (GO) | |
| Biological process | brain development Inferred from expression pattern. Source: RGD cellular response to fatty acidInferred from expression pattern. Source: RGD cellular response to nutrientInferred from expression pattern. Source: RGD ketone body catabolic processInferred from expression pattern. Source: RGD liver developmentInferred from expression pattern. Source: RGD |
| Cellular component | cytosol Inferred from direct assay. Source: RGD |
| Molecular function | acetyl-CoA C-acetyltransferase activity Inferred from direct assay. Source: RGD |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 397 | 397 | Acetyl-CoA acetyltransferase, cytosolic | PRO_0000271366 | |||||
Sites | |||||||||
| Active site | 92 | 1 | Acyl-thioester intermediate By similarity | ||||||
| Active site | 353 | 1 | Proton acceptor By similarity | ||||||
| Active site | 383 | 1 | Proton acceptor By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 1 | 1 | N-acetylmethionine By similarity | ||||||
| Modified residue | 200 | 1 | N6-acetyllysine By similarity | ||||||
| Modified residue | 233 | 1 | N6-acetyllysine By similarity | ||||||
| Modified residue | 235 | 1 | N6-acetyllysine By similarity | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Kidney. |
| [2] | Lubec G., Afjehi-Sadat L., Chen W.-Q. Submitted (APR-2007) to UniProtKB Cited for: PROTEIN SEQUENCE OF 16-39; 195-210; 218-223 AND 342-372, MASS SPECTROMETRY. Strain: Sprague-Dawley. Tissue: Hippocampus and Spinal cord. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BC083872 mRNA. Translation: AAH83872.1. |
| IPI | IPI00480766. |
| RefSeq | NP_001006996.1. NM_001006995.1. |
| UniGene | Rn.203063. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1WL4 based on UniProtKB Q9BWD1. |
| ProteinModelPortal | Q5XI22. |
| SMR | Q5XI22. Positions 4-396. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q5XI22. |
PTM databases | |
| PhosphoSite | Q5XI22. |
Proteomic databases | |
| PRIDE | Q5XI22. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENSRNOT00000026003; ENSRNOP00000026003; ENSRNOG00000019189. |
| GeneID | 308100. |
| KEGG | rno:308100. |
| NMPDR | fig|10116.3.peg.448. |
| UCSC | NM_001006995. rat. |
Organism-specific databases | |
| CTD | 224530. |
| RGD | 1359366. Acat2. |
Phylogenomic databases | |
| eggNOG | roNOG04002. |
| GeneTree | ENSGT00390000009412. |
| HOVERGEN | HBG003112. |
| InParanoid | Q5XI22. |
| OMA | KKSEAAN. |
| PhylomeDB | Q5XI22. |
Gene expression databases | |
| ArrayExpress | Q5XI22. |
| Genevestigator | Q5XI22. |
Family and domain databases | |
| InterPro | IPR002155. Thiolase. IPR016039. Thiolase-like. IPR016038. Thiolase-like_subgr. IPR020610. Thiolase_AS. IPR020617. Thiolase_C. IPR020613. Thiolase_CS. IPR020616. Thiolase_N. [Graphical view] |
| Gene3D | G3DSA:3.40.47.10. Thiolase-like_subgr. 4 hits. |
| KO | K00626. |
| PANTHER | PTHR18919. Thiolase. 1 hit. |
| Pfam | PF02803. Thiolase_C. 1 hit. PF00108. Thiolase_N. 1 hit. [Graphical view] |
| PIRSF | PIRSF000429. Ac-CoA_Ac_transf. 1 hit. |
| SUPFAM | SSF53901. Thiolase-like. 2 hits. |
| TIGRFAMs | TIGR01930. AcCoA-C-Actrans. 1 hit. |
| PROSITE | PS00098. THIOLASE_1. False negative. PS00737. THIOLASE_2. 1 hit. PS00099. THIOLASE_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 658342. |
Entry information
| Entry name | THIC_RAT | ||||||||
| Accession | Primary (citable) accession number: Q5XI22 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

Clusters with