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Q5WZL2 (RL3_LEGPL) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L3
Gene names
Name:rplC
Ordered Locus Names:lpl0369
OrganismLegionella pneumophila (strain Lens) [Complete proteome] [HAMAP]
Taxonomic identifier297245 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaLegionellalesLegionellaceaeLegionella

Protein attributes

Sequence length216 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP-Rule MF_01325

Subunit structure

Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19 By similarity.

Post-translational modification

Methylated by PrmB By similarity. HAMAP-Rule MF_01325

Sequence similarities

Belongs to the ribosomal protein L3P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   PTMMethylation
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 21621650S ribosomal protein L3 HAMAP-Rule MF_01325
PRO_0000241358

Amino acid modifications

Modified residue1521N5-methylglutamine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q5WZL2 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: C4636B7A63260342

FASTA21622,917
        10         20         30         40         50         60 
MMIGLLGRKI GMTRVFTPEG VSVPVSVVEV HPNRVSQVKT AANDGYSAVQ LTGGIKKSSK 

        70         80         90        100        110        120 
VSKPVAGHFA KAQIDAGDMQ VEFRIDSEDA FTPGQVISVA DVFTAGQYVD VSGLTKGKGF 

       130        140        150        160        170        180 
AGTVKRHNFR TQDASHGNSR SHRVPGSIGQ NQTPGRVFKG KKMAGHMGNA RCTIQSLELV 

       190        200        210 
KVDSERNLLL IKGAIPGAPG SRVEIKPAVK KQARGE 

« Hide

References

[1]"Evidence in the Legionella pneumophila genome for exploitation of host cell functions and high genome plasticity."
Cazalet C., Rusniok C., Brueggemann H., Zidane N., Magnier A., Ma L., Tichit M., Jarraud S., Bouchier C., Vandenesch F., Kunst F., Etienne J., Glaser P., Buchrieser C.
Nat. Genet. 36:1165-1173(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Lens.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR628337 Genomic DNA. Translation: CAH14600.1.
RefSeqYP_125736.1. NC_006369.1.

3D structure databases

ProteinModelPortalQ5WZL2.
SMRQ5WZL2. Positions 2-210.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING297245.lpl0369.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAH14600; CAH14600; lpl0369.
GeneID3115501.
KEGGlpf:lpl0369.
PATRIC22314231. VBILegPne33733_0457.

Organism-specific databases

LegioListlpl0369.
CMRSearch...

Phylogenomic databases

eggNOGCOG0087.
HOGENOMHOG000100368.
KOK02906.
OMASMQDATH.
OrthoDBEOG6WDSMH.

Enzyme and pathway databases

BioCycLPNE297245:GJD4-399-MONOMER.

Family and domain databases

HAMAPMF_01325_B. Ribosomal_L3_B.
InterProIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERPTHR11229. PTHR11229. 1 hit.
PfamPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMSSF50447. SSF50447. 1 hit.
TIGRFAMsTIGR03625. L3_bact. 1 hit.
PROSITEPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL3_LEGPL
AccessionPrimary (citable) accession number: Q5WZL2
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: November 23, 2004
Last modified: May 14, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries