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Q5WM15 (Q5WM15_BACSK) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ornithine aminotransferase HAMAP-Rule MF_01689
Short name=OAT HAMAP-Rule MF_01689
EC=2.6.1.13 HAMAP-Rule MF_01689
Alternative name(s):
Ornithine--oxo-acid aminotransferase HAMAP-Rule MF_01689
Gene names
Name:rocD HAMAP-Rule MF_01689
Ordered Locus Names:ABC0017
OrganismBacillus clausii (strain KSM-K16) [Complete proteome] [HAMAP] EMBL BAD62560.1
Taxonomic identifier66692 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus ›

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of ornithine to glutamate semialdehyde By similarity. HAMAP-Rule MF_01689

Catalytic activity

L-ornithine + a 2-oxo acid = L-glutamate 5-semialdehyde + an L-amino acid. HAMAP-Rule MF_01689

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01689

Pathway

Amino-acid biosynthesis; L-proline biosynthesis; L-glutamate 5-semialdehyde from L-ornithine: step 1/1. HAMAP-Rule MF_01689

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_01689.

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. OAT subfamily. HAMAP-Rule MF_01689

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue2571N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01689

Sequences

Sequence LengthMass (Da)Tools
Q5WM15 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 33BE3BC57E9EF297

FASTA40444,324
        10         20         30         40         50         60 
MAIEKSDHII EQTNAYGAHN YHPLPVVIAE AEGVWVKDPE GNKYMDMLSA YSALNQGHRH 

        70         80         90        100        110        120 
PKIIQALKEQ ADKVTLTSRA FHNDQLGPWT KRVAELTGKD KVLPMNTGVE AVETAIKAAR 

       130        140        150        160        170        180 
RWAYEVKGVE ENKAEIIAAK GNFHGRTLNA VSLSNDPGAT KHYGPFVPGI KKVAYGNVEV 

       190        200        210        220        230        240 
IREAITPNTA AMIIEPIQGE AGIIIPPEGY LQAVRDLCTE NDILFIADEV QTGFARTGKM 

       250        260        270        280        290        300 
FACEWENVVP DIYVMGKAMG GGVFPVSAIA ADKDIMDVFT PGSHGSTFGG NPLACAVSLA 

       310        320        330        340        350        360 
AIEVIEEENL VKKSLELGEY FTTALRAIDN DDLTAIRARG LFIGVEFNHP VRKYCEQLKE 

       370        380        390        400 
AGVLCKETHE NTIRFAPPLV ITKEELDWAI EKINYVLSKE KPVK

« Hide

References

[1]"The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KSM-K16.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP006627 Genomic DNA. Translation: BAD62560.1.
RefSeqYP_173521.1. NC_006582.1.

3D structure databases

ProteinModelPortalQ5WM15.
SMRQ5WM15. Positions 5-398.
ModBaseSearch...

Protein-protein interaction databases

STRING66692.ABC0017.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD62560; BAD62560; ABC0017.
GeneID3201522.
KEGGbcl:ABC0017.
PATRIC18919164. VBIBacCla58185_0019.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4992.
HOGENOMHOG000020206.
KOK00819.
OMARSNIVRD.
ProtClustDBPRK04073.

Enzyme and pathway databases

BioCycBCLA66692:GHMP-18-MONOMER.
UniPathwayUPA00098; UER00358.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
HAMAPMF_01689. Ornith_aminotrans_3.
InterProIPR005814. Aminotrans_3.
IPR010164. Orn_aminotrans.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PTHR11986:SF18. PTHR11986:SF18. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR01885. Orn_aminotrans. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5WM15_BACSK
AccessionPrimary (citable) accession number: Q5WM15
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: May 1, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info