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Q5WL06 (ARAB_BACSK) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribulokinase
EC=2.7.1.16
Gene names
Name:araB
Ordered Locus Names:ABC0407
OrganismBacillus clausii (strain KSM-K16) [Complete proteome] [HAMAP]
Taxonomic identifier66692 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length561 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520

Pathway

Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520

Sequence similarities

Belongs to the ribulokinase family.

Ontologies

Keywords
   Biological processArabinose catabolism
Carbohydrate metabolism
   LigandATP-binding
Nucleotide-binding
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processL-arabinose catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

ribulokinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 561561Ribulokinase HAMAP MF_00520
PRO_0000198355

Sequences

Sequence LengthMass (Da)Tools
Q5WL06 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 0657B604ABEFF596

FASTA56161,036
        10         20         30         40         50         60 
MKRYTIGIDY GTESGRAVLV DLENGAEVAE HVTPYAHGVI DQCLPDSGRS LEPEWALQHP 

        70         80         90        100        110        120 
GDYLDVLRLS VPKVVEIADI SASQVIGIGI DFTACTMLPI DKHGDPLCFD PQLAGRPHSW 

       130        140        150        160        170        180 
VKLWKHHAAQ DEADEINRIA EERKEAFLAR YGGKYSSEWM VSKIWQIFNE DPDMFEKADA 

       190        200        210        220        230        240 
FLEATDWVVA QLTGTIVRNS CTAGYKAMWH KRDGYPDDSF FAALDPGLAQ LTTTKLRGDI 

       250        260        270        280        290        300 
LAPGQRAGGL TAEMAETLGL KPGTAVAVGN VDAHVAVPAA GVVTPGKMVM VMGTSICHLV 

       310        320        330        340        350        360 
LAKEEREVEG MCGVVEDGIV PGYFGYEAGQ SAVGDIFAWL MKHGIPADLK QEAEQAGKPL 

       370        380        390        400        410        420 
HSLLEEKAAA YRPGETGLLA LDWWNGNRST LVDANLTGLI LGYTLQTKAE ELYRTLLEAT 

       430        440        450        460        470        480 
AFGTKKIIDA FRDSGVEVNV LYACGGLPQK NELLMQIYAD VTNLEIKVAA SKQTPALGAA 

       490        500        510        520        530        540 
MYASVAAGDE AGGYETIFAA AEKMAHTKAR SFKPNHENVR LYQALYEEYS KLHDYFGRGE 

       550        560 
NDVMKTLKQL RSRAKGGAVH A

« Hide

References

[1]"The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KSM-K16.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP006627 Genomic DNA. Translation: BAD62949.1.
RefSeqYP_173910.1. NC_006582.1.

3D structure databases

ProteinModelPortalQ5WL06.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5WL06.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000046281; EBBACP00000045042; EBBACG00000046272.
GeneID3201706.
GenomeReviewsGene locus ABC0407 in contig AP006627_GR.
KEGGbcl:ABC0407.
NMPDRfig|66692.3.peg.219.
PATRIC18920034. VBIBacCla58185_0422.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1069.
GeneTreeEBGT00070000032096.
HOGENOMHBG312681.
OMANGRRTPD.
ProtClustDBPRK04123.

Enzyme and pathway databases

BioCycBCLA66692:ABC0407-MONOMER.

Family and domain databases

HAMAPMF_00520. Ribulokinase.
[Tree]
InterProIPR000577. Carb_kinase_FGGY.
IPR018485. Carb_kinase_FGGY_C.
IPR018484. Carb_kinase_FGGY_N.
IPR005929. L_ribulokin.
[Graphical view]
KOK00853.
PANTHERPTHR10196. FGGY_kin. 1 hit.
PfamPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR01234. L-ribulokinase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameARAB_BACSK
AccessionPrimary (citable) accession number: Q5WL06
Entry history
Integrated into UniProtKB/Swiss-Prot: March 1, 2005
Last sequence update: November 23, 2004
Last modified: January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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