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Unreviewed, UniProtKB/TrEMBL Q5WKL1 (Q5WKL1_BACSK)

Last modified November 3, 2009. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Xylan 1,4-beta-xylosidase EMBL BAD63094.1
    EC=3.2.1.37
Gene names
Name: xynB EMBL BAD63094.1
Ordered Locus Names: ABC0554
OrganismBacillus clausii (strain KSM-K16) [Complete proteome] [HAMAP]
Taxonomic identifier66692 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesBacillaceaeBacillus

Protein attributes

Sequence length555 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords
   Molecular functionGlycosidase EMBL BAD63094.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionxylan 1,4-beta-xylosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5WKL1-1 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 77DF02425DEDE25A

FASTA55563,400
        10         20         30         40         50         60 
MIRNPVLKGF NPDPSICRVG DDYYMAVSTF EWFPGVQIHH SRDLVNWRLI SRPLNRISQL 

        70         80         90        100        110        120 
NMIGNPDSGG VWAPCLSYSN GKFWLVYSDV KVVEGNTWKD GHNYLVTCET IDGEWSEPIY 

       130        140        150        160        170        180 
LNSSGFDPSL FHDEDGRKYV VNMVWDQRVY NHRFYGICIQ EYSVLEKRLV GKPQMIFKGT 

       190        200        210        220        230        240 
ELGLTEAPHL YQANGYYYLL TAEGGTKYEH AATIARSKDI YGPYEVHPQN PILSSWADPS 

       250        260        270        280        290        300 
HPLQKAGHAS LVETQHGDWY MAHLLGRPIK RQGKKLLEER GFCPLGRETA IQKIEWKDDW 

       310        320        330        340        350        360 
PYVVNGPLPS VEVAGPKLPE VQWPQDYPEC DPFDHPVLNH HYQTLRIPFN EEIGMIDHEA 

       370        380        390        400        410        420 
GILRLFGRES LHSKHTQALV ARRWQSFHFD AATEVSFYPE TFQQAAGLIC YYDTENWVSL 

       430        440        450        460        470        480 
QVTWHEQKGR ILDLVQCDHF HVSQPLQGSE IVVPEQAATV HLKVSVRYDT FSFAYSFDGS 

       490        500        510        520        530        540 
HFEDIGVSFD TYKLSDDYIA HGGFFTGAFV GMHCQDTSGV RKHADFHSFS YHELESNSLN 

       550 
QAEGGTSARK SVIHG 

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References

[1]"The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

AP006627 Genomic DNA. Translation: BAD63094.1.
RefSeqYP_174055.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ5WKL1.

Protein family/group databases

CAZyGH43. Glycoside Hydrolase Family 43.

Genome annotation databases

GeneID3203598.
GenomeReviewsGene locus ABC0554 in contig AP006627_GR.
KEGGbcl:ABC0554.
NMPDRfig|66692.3.peg.555.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ5WKL1.
OMAGPYEVHP.

Enzyme and pathway databases

BioCycBCLA66692:ABC0554-MON.

Family and domain databases

InterProIPR013320. ConA-like_subgrp.
IPR006710. Glyco_hydro_43.
[Graphical view]
Gene3DG3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
PANTHERPTHR22925. Glyco_hydro_43. 1 hit.
PfamPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5WKL1_BACSK
AccessionPrimary (citable) accession number: Q5WKL1
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: November 3, 2009
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information