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Protein
Submitted name:

Uncharacterized protein

Gene

ABC1601

Organism
Bacillus clausii (strain KSM-K16)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBCLA66692:GHMP-1664-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:ABC1601Imported
OrganismiBacillus clausii (strain KSM-K16)Imported
Taxonomic identifieri66692 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001168 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi66692.ABC1601.

Structurei

3D structure databases

ProteinModelPortaliQ5WHL9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000008893.
KOiK01971.
OMAiFEGMRID.
OrthoDBiEOG661H49.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. LigD_ligase_dom.
IPR014145. LigD_pol_dom.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5WHL9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKPMKLTETT AFPQSTGWVA EPKYDGYRCL VSITDTSIEL ISRNGRLLNH
60 70 80 90 100
AFPEVVSAFE ERRTKLSNEL PLVLDGELVC LLNGYASHFP AVQTRSRMSN
110 120 130 140 150
VHVIEKEMVS RPCQWIAFDI LNQPNVPYRE RRKQLLSFCK RADIPALTPL
160 170 180 190 200
GGVPTLGVVE STSAIQALLT TVKRYNGEGI VLKKQLSPYN QNIRSKDWLK
210 220 230 240 250
LKHYRLVPVL VTFFDATNGY FHGSVYHQQG ALNEVAIFKH GLLPDDAKTL
260 270 280 290 300
ANFFRTKGTA EKNGFRLAPS IVVELACIGL SGGQLREVSF VRFLHHADPN
310 320 330 340 350
DITMTTLFHG LYPLPDIVET TSLDKPLWEQ VTKADYLHYL QAVMPFMLPF
360 370 380 390 400
LYQRALTVIR FPHGTFANER FYQKHIPNYA PAYVNSAWLE DICYILCNNP
410 420 430 440 450
ETLIWLGNQL ALELHIPFQT IESSKPDEIV FDLDPPSQDQ FGLAQEAALD
460 470 480 490 500
MKQIFNRFQL PFFCKTTGGK GLQVHIPLEK QTLTYEETGR FMKFVADFLC
510 520 530 540 550
QQKPGKYTTE RLKKKRRNRL YIDYVQHAYN KTVIAPYSMR ETGFAAVPLR
560 570 580 590 600
EDELASPTLS PQQFSYVDVL RRIQQFENPF IGYERERVSK ERFIQLLDEI

GI
Length:602
Mass (Da):69,019
Last modified:November 23, 2004 - v1
Checksum:iFCEE90B0F7028B29
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006627 Genomic DNA. Translation: BAD64136.1.
RefSeqiWP_011246445.1. NC_006582.1.

Genome annotation databases

EnsemblBacteriaiBAD64136; BAD64136; ABC1601.
KEGGibcl:ABC1601.
PATRICi18922664. VBIBacCla58185_1700.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006627 Genomic DNA. Translation: BAD64136.1.
RefSeqiWP_011246445.1. NC_006582.1.

3D structure databases

ProteinModelPortaliQ5WHL9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi66692.ABC1601.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD64136; BAD64136; ABC1601.
KEGGibcl:ABC1601.
PATRICi18922664. VBIBacCla58185_1700.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000008893.
KOiK01971.
OMAiFEGMRID.
OrthoDBiEOG661H49.

Enzyme and pathway databases

BioCyciBCLA66692:GHMP-1664-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. LigD_ligase_dom.
IPR014145. LigD_pol_dom.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
    Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
    Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KSM-K16Imported.

Entry informationi

Entry nameiQ5WHL9_BACSK
AccessioniPrimary (citable) accession number: Q5WHL9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: July 22, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.