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Q5WHL9

- Q5WHL9_BACSK

UniProt

Q5WHL9 - Q5WHL9_BACSK

Protein
Submitted name:

Uncharacterized protein

Gene

ABC1601

Organism
Bacillus clausii (strain KSM-K16)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (23 Nov 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Enzyme and pathway databases

    BioCyciBCLA66692:GHMP-1664-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:ABC1601Imported
    OrganismiBacillus clausii (strain KSM-K16)Imported
    Taxonomic identifieri66692 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000001168: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi66692.ABC1601.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5WHL9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000008893.
    KOiK01971.
    OMAiHVLAAIC.
    OrthoDBiEOG661H49.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5WHL9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKPMKLTETT AFPQSTGWVA EPKYDGYRCL VSITDTSIEL ISRNGRLLNH    50
    AFPEVVSAFE ERRTKLSNEL PLVLDGELVC LLNGYASHFP AVQTRSRMSN 100
    VHVIEKEMVS RPCQWIAFDI LNQPNVPYRE RRKQLLSFCK RADIPALTPL 150
    GGVPTLGVVE STSAIQALLT TVKRYNGEGI VLKKQLSPYN QNIRSKDWLK 200
    LKHYRLVPVL VTFFDATNGY FHGSVYHQQG ALNEVAIFKH GLLPDDAKTL 250
    ANFFRTKGTA EKNGFRLAPS IVVELACIGL SGGQLREVSF VRFLHHADPN 300
    DITMTTLFHG LYPLPDIVET TSLDKPLWEQ VTKADYLHYL QAVMPFMLPF 350
    LYQRALTVIR FPHGTFANER FYQKHIPNYA PAYVNSAWLE DICYILCNNP 400
    ETLIWLGNQL ALELHIPFQT IESSKPDEIV FDLDPPSQDQ FGLAQEAALD 450
    MKQIFNRFQL PFFCKTTGGK GLQVHIPLEK QTLTYEETGR FMKFVADFLC 500
    QQKPGKYTTE RLKKKRRNRL YIDYVQHAYN KTVIAPYSMR ETGFAAVPLR 550
    EDELASPTLS PQQFSYVDVL RRIQQFENPF IGYERERVSK ERFIQLLDEI 600
    GI 602
    Length:602
    Mass (Da):69,019
    Last modified:November 23, 2004 - v1
    Checksum:iFCEE90B0F7028B29
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006627 Genomic DNA. Translation: BAD64136.1.
    RefSeqiYP_175097.1. NC_006582.1.

    Genome annotation databases

    EnsemblBacteriaiBAD64136; BAD64136; ABC1601.
    GeneIDi3201250.
    KEGGibcl:ABC1601.
    PATRICi18922664. VBIBacCla58185_1700.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006627 Genomic DNA. Translation: BAD64136.1 .
    RefSeqi YP_175097.1. NC_006582.1.

    3D structure databases

    ProteinModelPortali Q5WHL9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 66692.ABC1601.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD64136 ; BAD64136 ; ABC1601 .
    GeneIDi 3201250.
    KEGGi bcl:ABC1601.
    PATRICi 18922664. VBIBacCla58185_1700.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000008893.
    KOi K01971.
    OMAi HVLAAIC.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci BCLA66692:GHMP-1664-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
      Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
      Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KSM-K16Imported.

    Entry informationi

    Entry nameiQ5WHL9_BACSK
    AccessioniPrimary (citable) accession number: Q5WHL9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 23, 2004
    Last sequence update: November 23, 2004
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3