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Q5WHL9 (Q5WHL9_BACSK) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:ABC1601 EMBL BAD64136.1
OrganismBacillus clausii (strain KSM-K16) [Complete proteome] [HAMAP] EMBL BAD64136.1
Taxonomic identifier66692 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length602 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5WHL9 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: FCEE90B0F7028B29

FASTA60269,019
        10         20         30         40         50         60 
MKPMKLTETT AFPQSTGWVA EPKYDGYRCL VSITDTSIEL ISRNGRLLNH AFPEVVSAFE 

        70         80         90        100        110        120 
ERRTKLSNEL PLVLDGELVC LLNGYASHFP AVQTRSRMSN VHVIEKEMVS RPCQWIAFDI 

       130        140        150        160        170        180 
LNQPNVPYRE RRKQLLSFCK RADIPALTPL GGVPTLGVVE STSAIQALLT TVKRYNGEGI 

       190        200        210        220        230        240 
VLKKQLSPYN QNIRSKDWLK LKHYRLVPVL VTFFDATNGY FHGSVYHQQG ALNEVAIFKH 

       250        260        270        280        290        300 
GLLPDDAKTL ANFFRTKGTA EKNGFRLAPS IVVELACIGL SGGQLREVSF VRFLHHADPN 

       310        320        330        340        350        360 
DITMTTLFHG LYPLPDIVET TSLDKPLWEQ VTKADYLHYL QAVMPFMLPF LYQRALTVIR 

       370        380        390        400        410        420 
FPHGTFANER FYQKHIPNYA PAYVNSAWLE DICYILCNNP ETLIWLGNQL ALELHIPFQT 

       430        440        450        460        470        480 
IESSKPDEIV FDLDPPSQDQ FGLAQEAALD MKQIFNRFQL PFFCKTTGGK GLQVHIPLEK 

       490        500        510        520        530        540 
QTLTYEETGR FMKFVADFLC QQKPGKYTTE RLKKKRRNRL YIDYVQHAYN KTVIAPYSMR 

       550        560        570        580        590        600 
ETGFAAVPLR EDELASPTLS PQQFSYVDVL RRIQQFENPF IGYERERVSK ERFIQLLDEI 


GI 

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References

[1]"The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KSM-K16.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006627 Genomic DNA. Translation: BAD64136.1.
RefSeqYP_175097.1. NC_006582.1.

3D structure databases

ProteinModelPortalQ5WHL9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING66692.ABC1601.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD64136; BAD64136; ABC1601.
GeneID3201250.
KEGGbcl:ABC1601.
PATRIC18922664. VBIBacCla58185_1700.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000008893.
KOK01971.
OMAEYCESER.
OrthoDBEOG661H49.
ProtClustDBPRK09633.

Enzyme and pathway databases

BioCycBCLA66692:GHMP-1664-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5WHL9_BACSK
AccessionPrimary (citable) accession number: Q5WHL9
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: November 13, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)