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Q5WHL9

- Q5WHL9_BACSK

UniProt

Q5WHL9 - Q5WHL9_BACSK

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Protein
Submitted name:

Uncharacterized protein

Gene
ABC1601
Organism
Bacillus clausii (strain KSM-K16)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBCLA66692:GHMP-1664-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:ABC1601Imported
OrganismiBacillus clausii (strain KSM-K16)Imported
Taxonomic identifieri66692 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001168: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi66692.ABC1601.

Structurei

3D structure databases

ProteinModelPortaliQ5WHL9.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000008893.
KOiK01971.
OMAiHVLAAIC.
OrthoDBiEOG661H49.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5WHL9-1 [UniParc]FASTAAdd to Basket

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MKPMKLTETT AFPQSTGWVA EPKYDGYRCL VSITDTSIEL ISRNGRLLNH    50
AFPEVVSAFE ERRTKLSNEL PLVLDGELVC LLNGYASHFP AVQTRSRMSN 100
VHVIEKEMVS RPCQWIAFDI LNQPNVPYRE RRKQLLSFCK RADIPALTPL 150
GGVPTLGVVE STSAIQALLT TVKRYNGEGI VLKKQLSPYN QNIRSKDWLK 200
LKHYRLVPVL VTFFDATNGY FHGSVYHQQG ALNEVAIFKH GLLPDDAKTL 250
ANFFRTKGTA EKNGFRLAPS IVVELACIGL SGGQLREVSF VRFLHHADPN 300
DITMTTLFHG LYPLPDIVET TSLDKPLWEQ VTKADYLHYL QAVMPFMLPF 350
LYQRALTVIR FPHGTFANER FYQKHIPNYA PAYVNSAWLE DICYILCNNP 400
ETLIWLGNQL ALELHIPFQT IESSKPDEIV FDLDPPSQDQ FGLAQEAALD 450
MKQIFNRFQL PFFCKTTGGK GLQVHIPLEK QTLTYEETGR FMKFVADFLC 500
QQKPGKYTTE RLKKKRRNRL YIDYVQHAYN KTVIAPYSMR ETGFAAVPLR 550
EDELASPTLS PQQFSYVDVL RRIQQFENPF IGYERERVSK ERFIQLLDEI 600
GI 602
Length:602
Mass (Da):69,019
Last modified:November 23, 2004 - v1
Checksum:iFCEE90B0F7028B29
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP006627 Genomic DNA. Translation: BAD64136.1.
RefSeqiYP_175097.1. NC_006582.1.

Genome annotation databases

EnsemblBacteriaiBAD64136; BAD64136; ABC1601.
GeneIDi3201250.
KEGGibcl:ABC1601.
PATRICi18922664. VBIBacCla58185_1700.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP006627 Genomic DNA. Translation: BAD64136.1 .
RefSeqi YP_175097.1. NC_006582.1.

3D structure databases

ProteinModelPortali Q5WHL9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 66692.ABC1601.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAD64136 ; BAD64136 ; ABC1601 .
GeneIDi 3201250.
KEGGi bcl:ABC1601.
PATRICi 18922664. VBIBacCla58185_1700.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000008893.
KOi K01971.
OMAi HVLAAIC.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci BCLA66692:GHMP-1664-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
    Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
    Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KSM-K16.

Entry informationi

Entry nameiQ5WHL9_BACSK
AccessioniPrimary (citable) accession number: Q5WHL9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: May 14, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3