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Protein
Submitted name:

Alpha-amylase

Gene

ABC1611

Organism
Bacillus clausii (strain KSM-K16)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseImported, Hydrolase

Protein family/group databases

CAZyiCBM25. Carbohydrate-Binding Module Family 25.
CBM26. Carbohydrate-Binding Module Family 26.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:ABC1611Imported
OrganismiBacillus clausii (strain KSM-K16)Imported
Taxonomic identifieri66692 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001168 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 33Sequence analysisAdd BLAST33
ChainiPRO_500426338434 – 955Sequence analysisAdd BLAST922

Interactioni

Protein-protein interaction databases

STRINGi66692.ABC1611.

Structurei

3D structure databases

ProteinModelPortaliQ5WHK9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini51 – 505AamyInterPro annotationAdd BLAST455
Domaini863 – 941CBM_25InterPro annotationAdd BLAST79

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4108IUK. Bacteria.
COG0366. LUCA.
HOGENOMiHOG000140051.
KOiK01176.
OMAiFAHYAYH.
OrthoDBiPOG091H07J7.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiView protein in InterPro
IPR005085. CBM25.
IPR031965. CBM26.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 2 hits.
PF16738. CBM26. 1 hit.
PF03423. CBM_25. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SM01066. CBM_25. 1 hit.
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Q5WHK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MINIRKTKVF LACIVMVTFS FLLSTSSVND AYASQNSDQK PFSWDNATVY
60 70 80 90 100
FAITDRFNDG NRGNNDSYGR PQKDAWGQNI GTFHGGDLQG LTDKLNEGYF
110 120 130 140 150
TDLGINTIWI SAPYEQIHGW VGGGSDGDFA HYAYHGYYAL DYTTVDQNMG
160 170 180 190 200
TVEEMREFVN TAHEQGIRVV LDVVMNHPGY NTIKDMNEYG FGNPGVSEDW
210 220 230 240 250
TPGEGQTWHD VHNHIHYDDA SPWSTWWGPW VRAGIGGYES CGNSETTMCL
260 270 280 290 300
AGLPDFRTEL THSVGLPPLL ETKWSQERRE GYEDWIVPTA SDLRRDLDIA
310 320 330 340 350
PADYIVQWLA AWVEEFGIDG FRIDTAKHVE LFRWQQLKDA ANEALWSWRE
360 370 380 390 400
ENPDAPGASW TDDFWMVGEV WGHGVGRSEY FDYGFDSIIN FTFQGEHGNG
410 420 430 440 450
PAYRLDTMED TFSHYANQIN MDASFNVLSY LSQHDTHLYP RERLVDGGTY
460 470 480 490 500
LMLLPGGVKL FYGDETARPF GPTGSDPQQG TRSSMNWDSV HEDVLSHWQK
510 520 530 540 550
MGQFRNNHLA IGAGAHKQIG TNPYTFSRTY VEDGVDDRVV VTVGATGETT
560 570 580 590 600
IDVSSVFSDG QTVRDFYTGD STVVENGKAT FAAHQNGVIL VETEGETIPS
610 620 630 640 650
VSASPQGGEF SSEELEVTLS VLQAESGAYT IDGSDPKEKG TPFADGEVLT
660 670 680 690 700
IGSDLAIDES LTLRLFAKNE AGEAEAEYTF TKVPPYPHVF ADPPGGSFSG
710 720 730 740 750
DSLEVTLHVQ NVGEGAYSVN GAAEQSFMDG DAITIGEGTE AGEEVTLQLK
760 770 780 790 800
AENEFGSTEE MYTFIKSPGL TAYFKNPDTW GTPHIYYYET EPKVEEPSWG
810 820 830 840 850
SAPEMELVEN GWYKYTIEGA ESARVLFKDA GANQWPGPGE EGFYRDQDGW
860 870 880 890 900
FDGEWHSEKP VQANDITIYY KTSWTNPHIH YSLNQEAWTT LPGVPLNSSE
910 920 930 940 950
YEGYAKITIE TEEGSQLRAA FNNGRGQWDN NQGRDYVFHS GINTLADGVI

VRGTP
Length:955
Mass (Da):106,247
Last modified:November 23, 2004 - v1
Checksum:i1D4480735B0E5392
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006627 Genomic DNA. Translation: BAD64146.1.
RefSeqiWP_011246455.1. NC_006582.1.

Genome annotation databases

EnsemblBacteriaiBAD64146; BAD64146; ABC1611.
GeneIDi34042838.
KEGGibcl:ABC1611.

Similar proteinsi

Entry informationi

Entry nameiQ5WHK9_BACSK
AccessioniPrimary (citable) accession number: Q5WHK9
Entry historyiIntegrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: November 22, 2017
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported