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Q5WHK9 (Q5WHK9_BACSK) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha-amylase EMBL BAD64146.1
EC=3.2.1.1 EMBL BAD64146.1
Gene names
Ordered Locus Names:ABC1611
OrganismBacillus clausii (strain KSM-K16) [Complete proteome] [HAMAP]
Taxonomic identifier66692 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length955 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL BAD64146.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha-amylase activity

Inferred from electronic annotation. Source: EC

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5WHK9 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 1D4480735B0E5392

FASTA955106,247
        10         20         30         40         50         60 
MINIRKTKVF LACIVMVTFS FLLSTSSVND AYASQNSDQK PFSWDNATVY FAITDRFNDG 

        70         80         90        100        110        120 
NRGNNDSYGR PQKDAWGQNI GTFHGGDLQG LTDKLNEGYF TDLGINTIWI SAPYEQIHGW 

       130        140        150        160        170        180 
VGGGSDGDFA HYAYHGYYAL DYTTVDQNMG TVEEMREFVN TAHEQGIRVV LDVVMNHPGY 

       190        200        210        220        230        240 
NTIKDMNEYG FGNPGVSEDW TPGEGQTWHD VHNHIHYDDA SPWSTWWGPW VRAGIGGYES 

       250        260        270        280        290        300 
CGNSETTMCL AGLPDFRTEL THSVGLPPLL ETKWSQERRE GYEDWIVPTA SDLRRDLDIA 

       310        320        330        340        350        360 
PADYIVQWLA AWVEEFGIDG FRIDTAKHVE LFRWQQLKDA ANEALWSWRE ENPDAPGASW 

       370        380        390        400        410        420 
TDDFWMVGEV WGHGVGRSEY FDYGFDSIIN FTFQGEHGNG PAYRLDTMED TFSHYANQIN 

       430        440        450        460        470        480 
MDASFNVLSY LSQHDTHLYP RERLVDGGTY LMLLPGGVKL FYGDETARPF GPTGSDPQQG 

       490        500        510        520        530        540 
TRSSMNWDSV HEDVLSHWQK MGQFRNNHLA IGAGAHKQIG TNPYTFSRTY VEDGVDDRVV 

       550        560        570        580        590        600 
VTVGATGETT IDVSSVFSDG QTVRDFYTGD STVVENGKAT FAAHQNGVIL VETEGETIPS 

       610        620        630        640        650        660 
VSASPQGGEF SSEELEVTLS VLQAESGAYT IDGSDPKEKG TPFADGEVLT IGSDLAIDES 

       670        680        690        700        710        720 
LTLRLFAKNE AGEAEAEYTF TKVPPYPHVF ADPPGGSFSG DSLEVTLHVQ NVGEGAYSVN 

       730        740        750        760        770        780 
GAAEQSFMDG DAITIGEGTE AGEEVTLQLK AENEFGSTEE MYTFIKSPGL TAYFKNPDTW 

       790        800        810        820        830        840 
GTPHIYYYET EPKVEEPSWG SAPEMELVEN GWYKYTIEGA ESARVLFKDA GANQWPGPGE 

       850        860        870        880        890        900 
EGFYRDQDGW FDGEWHSEKP VQANDITIYY KTSWTNPHIH YSLNQEAWTT LPGVPLNSSE 

       910        920        930        940        950 
YEGYAKITIE TEEGSQLRAA FNNGRGQWDN NQGRDYVFHS GINTLADGVI VRGTP

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References

[1]"The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP006627 Genomic DNA. Translation: BAD64146.1.
RefSeqYP_175107.1. NC_006582.1.

3D structure databases

ProteinModelPortalQ5WHK9.
SMRQ5WHK9. Positions 767-860, 863-955.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5WHK9.

Protein family/group databases

CAZyCBM25. Carbohydrate-Binding Module Family 25.
CBM26. Carbohydrate-Binding Module Family 26.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000046428; EBBACP00000045189; EBBACG00000046419.
GeneID3201259.
GenomeReviewsGene locus ABC1611 in contig AP006627_GR.
KEGGbcl:ABC1611.
NMPDRfig|66692.3.peg.1573.
PATRIC18922690. VBIBacCla58185_1713.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
GeneTreeEBGT00070000031973.
HOGENOMHBG345590.
OMATELTHSV.
ProtClustDBCLSK2565252.

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR005085. CBM_fam25.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
KOK01176.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
SM01066. CBM_25. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5WHK9_BACSK
AccessionPrimary (citable) accession number: Q5WHK9
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: January 25, 2012
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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