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Protein

30S ribosomal protein S21

Gene

rpsU

Organism
Bacillus clausii (strain KSM-K16)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S21UniRule annotation
Gene namesi
Name:rpsUUniRule annotation
Ordered Locus Names:ABC1669
OrganismiBacillus clausii (strain KSM-K16)
Taxonomic identifieri66692 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001168 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001782991 – 5730S ribosomal protein S21Add BLAST57

Interactioni

Protein-protein interaction databases

STRINGi66692.ABC1669.

Structurei

3D structure databases

ProteinModelPortaliQ5WHF1.
SMRiQ5WHF1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bS21 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105VCC. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157460.
KOiK02970.
OMAiDIKRRRH.
OrthoDBiPOG091H0359.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21. 1 hit.
InterProiView protein in InterPro
IPR001911. Ribosomal_S21.
IPR018278. Ribosomal_S21_CS.
PANTHERiPTHR21109. PTHR21109. 1 hit.
PfamiView protein in Pfam
PF01165. Ribosomal_S21. 1 hit.
PRINTSiPR00976. RIBOSOMALS21.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005521. Ribosomal_S21. 1 hit.
TIGRFAMsiTIGR00030. S21p. 1 hit.
PROSITEiView protein in PROSITE
PS01181. RIBOSOMAL_S21. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5WHF1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAETRVRKNE SIDAALRRFK RSLSKEGTLA EVRKRKHFEK PSVKRKKKSE

AARKRKF
Length:57
Mass (Da):6,800
Last modified:November 23, 2004 - v1
Checksum:i2E4C1E054BFD2C1E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006627 Genomic DNA. Translation: BAD64204.1.
RefSeqiWP_011246513.1. NC_006582.1.

Genome annotation databases

EnsemblBacteriaiBAD64204; BAD64204; ABC1669.
KEGGibcl:ABC1669.
PATRICi18922812. VBIBacCla58185_1774.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006627 Genomic DNA. Translation: BAD64204.1.
RefSeqiWP_011246513.1. NC_006582.1.

3D structure databases

ProteinModelPortaliQ5WHF1.
SMRiQ5WHF1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi66692.ABC1669.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD64204; BAD64204; ABC1669.
KEGGibcl:ABC1669.
PATRICi18922812. VBIBacCla58185_1774.

Phylogenomic databases

eggNOGiENOG4105VCC. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157460.
KOiK02970.
OMAiDIKRRRH.
OrthoDBiPOG091H0359.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21. 1 hit.
InterProiView protein in InterPro
IPR001911. Ribosomal_S21.
IPR018278. Ribosomal_S21_CS.
PANTHERiPTHR21109. PTHR21109. 1 hit.
PfamiView protein in Pfam
PF01165. Ribosomal_S21. 1 hit.
PRINTSiPR00976. RIBOSOMALS21.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005521. Ribosomal_S21. 1 hit.
TIGRFAMsiTIGR00030. S21p. 1 hit.
PROSITEiView protein in PROSITE
PS01181. RIBOSOMAL_S21. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS21_BACSK
AccessioniPrimary (citable) accession number: Q5WHF1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: November 23, 2004
Last modified: May 10, 2017
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.