Reviewed,
UniProtKB/Swiss-Prot Q5WGQ4 (DAPB_BACSK)
Last modified
November 3, 2009.
Version 36.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Dihydrodipicolinate reductase Short name=DHPR EC=1.3.1.26 | ||||
| Gene names |
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| Organism | Bacillus clausii (strain KSM-K16) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 66692 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus |
Protein attributes
| Sequence length | 264 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | 2,3,4,5-tetrahydrodipicolinate + NAD(P)+ = 2,3-dihydrodipicolinate + NAD(P)H. HAMAP MF_00102 |
| Pathway | Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 4/4. HAMAP MF_00102 |
| Subcellular location | Cytoplasm By similarity. |
| Sequence similarities | Belongs to the dihydrodipicolinate reductase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Diaminopimelate biosynthesis Lysine biosynthesis |
| Cellular component | Cytoplasm |
| Ligand | NADP |
| Molecular function | Oxidoreductase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | diaminopimelate biosynthetic process Inferred from electronic annotation. Source: HAMAP oxidation reductionInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | binding Inferred from electronic annotation. Source: InterPro dihydrodipicolinate reductase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 264 | 264 | Dihydrodipicolinate reductase HAMAP MF_00102 | PRO_0000228323 | |||
Sequences
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References
| [1] | "The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16." Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K. Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| AP006627 Genomic DNA. Translation: BAD64451.1. | |
| RefSeq | YP_175412.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q5WGQ4. |
Genome annotation databases | |
| GeneID | 3203886. |
| GenomeReviews | Gene locus ABC1916 in contig AP006627_GR. |
| KEGG | bcl:ABC1916. |
| NMPDR | fig|66692.3.peg.1960. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | Q5WGQ4. |
| OMA | VLMMKFA. |
Enzyme and pathway databases | |
| BioCyc | BCLA66692:ABC1916-MON. |
Family and domain databases | |
| HAMAP | MF_00102. [Tree] |
| InterPro | IPR000846. DapB. IPR011770. Dihydrodipicolinate_Rdtase. IPR016040. NAD(P)-bd_dom. [Graphical view] |
| Gene3D | G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. |
| PANTHER | PTHR20836. DapB_bac/pln. 1 hit. |
| Pfam | PF05173. DapB_C. 1 hit. PF01113. DapB_N. 1 hit. [Graphical view] |
| ProDom | PD004105. DapB. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| TIGRFAMs | TIGR00036. dapB. 1 hit. |
| PROSITE | PS01298. DAPB. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | DAPB_BACSK | ||||||||
| Accession | Primary (citable) accession number: Q5WGQ4 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


