Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q5WFZ6 (Q5WFZ6_BACSK) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641 RuleBase RU003572
EC=2.3.3.9 HAMAP MF_00641 RuleBase RU003572
Gene names
Name:glcB HAMAP MF_00641
Ordered Locus Names:ABC2174
OrganismBacillus clausii (strain KSM-K16) [Complete proteome] [HAMAP]
Taxonomic identifier66692 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length727 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641 RuleBase RU003572.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641 RuleBase RU003572

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3381Proton acceptor By similarity HAMAP MF_00641
Active site6291Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
Q5WFZ6 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: D51C8D9141D29293

FASTA72780,342
        10         20         30         40         50         60 
MTNYVKAGDL QVAQELYEFI NTKVIPDSGV TKNDFWSGFA NLVKDLVPIN KALLAKRDRI 

        70         80         90        100        110        120 
QDQIHAWHRA NQSYRFQDYK AFLEEIGYLE PMVDDFQITT EDVDDEIALQ AGPQLVVPVN 

       130        140        150        160        170        180 
NARFAINAAN ARWGSLYDAL YGTDAISEEA GADKGNAYNP ARGAKVIAYA KQFLDDTIPL 

       190        200        210        220        230        240 
KQGSHKDVVH YSIDDGALAA KRKDGTTTGL KDGTQFTGYQ GETAAPSALL FVHHGLHLEI 

       250        260        270        280        290        300 
QIDATHPIGQ TDPANVKDIV LESAITTIMD CEDSVTAVDA EDKVLVYANW LGLMKGDLTS 

       310        320        330        340        350        360 
TFVKGDRTIK RTLNSDRAYI SPDGSSLTLS GRSLLFVRNV GHLMTTNAVL DKDGQEVPEG 

       370        380        390        400        410        420 
FLDCLVTSLI GKHSLLGNGA YRNSQKGSIY IVKPKMHGSE EVALANELFN RVEDIIGLTR 

       430        440        450        460        470        480 
HTIKIGVMDE ERRTSLNLKN CIHAVKERVV FINTGFLDRT GDEIHTSMEA GPMIRKQEMK 

       490        500        510        520        530        540 
SSAWLNGYEQ ANVAVGLAAG LKGKAQIGKG MWAMPDQMAD MLKQKGAQLQ AGGNTAWVPS 

       550        560        570        580        590        600 
PTAAVLHAIH YHQINVNAVQ QEIASEQSDY RDEMLQIPVA EAPNWSPQEI QEELDNNAQG 

       610        620        630        640        650        660 
ILGYVVRWVE MGIGCSKVPD INNVALMEDR ATLRISSQHM MNWLHHGICT KEQVLETLKR 

       670        680        690        700        710        720 
MAKVVDQQNT GDPEYVPMAL DYENSVAFQA ACDLVFEGYH QPSGYTEPIL HRRRKEAKAK 


ASVMTRK

« Hide

References

[1]"The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP006627 Genomic DNA. Translation: BAD64709.1.
RefSeqYP_175670.1. NC_006582.1.

3D structure databases

ProteinModelPortalQ5WFZ6.
SMRQ5WFZ6. Positions 2-722.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5WFZ6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000046578; EBBACP00000045339; EBBACG00000046569.
GeneID3204104.
GenomeReviewsGene locus ABC2174 in contig AP006627_GR.
KEGGbcl:ABC2174.
NMPDRfig|66692.3.peg.2478.
PATRIC18923922. VBIBacCla58185_2324.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2225.
GeneTreeEBGT00050000006121.
HOGENOMHBG350005.
OMAPKMHGPD.
ProtClustDBPRK02999.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5WFZ6_BACSK
AccessionPrimary (citable) accession number: Q5WFZ6
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: December 14, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info