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Protein

Exodeoxyribonuclease 7 small subunit

Gene

xseB

Organism
Bacillus clausii (strain KSM-K16)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.UniRule annotation

Catalytic activityi

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionExonuclease, Hydrolase, Nuclease

Enzyme and pathway databases

BioCyciBCLA66692:G1G25-2607-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Exodeoxyribonuclease 7 small subunitUniRule annotation (EC:3.1.11.6UniRule annotation)
Alternative name(s):
Exodeoxyribonuclease VII small subunitUniRule annotation
Short name:
Exonuclease VII small subunitUniRule annotation
Gene namesi
Name:xseBUniRule annotation
Ordered Locus Names:ABC2464
OrganismiBacillus clausii (strain KSM-K16)
Taxonomic identifieri66692 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001168 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002069201 – 79Exodeoxyribonuclease 7 small subunitAdd BLAST79

Interactioni

Subunit structurei

Heterooligomer composed of large and small subunits.UniRule annotation

Protein-protein interaction databases

STRINGi66692.ABC2464

Structurei

3D structure databases

ProteinModelPortaliQ5WF61
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the XseB family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1722 LUCA
HOGENOMiHOG000228798
KOiK03602
OMAiPLNDYKG
OrthoDBiPOG091H02EJ

Family and domain databases

Gene3Di1.10.287.10401 hit
HAMAPiMF_00337 Exonuc_7_S, 1 hit
InterProiView protein in InterPro
IPR003761 Exonuc_VII_S
IPR037004 Exonuc_VII_ssu_sf
PANTHERiPTHR34137 PTHR34137, 1 hit
PfamiView protein in Pfam
PF02609 Exonuc_VII_S, 1 hit
PIRSFiPIRSF006488 Exonuc_VII_S, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD028235 Exonuc_VII_S, 1 hit
TIGRFAMsiTIGR01280 xseB, 1 hit

Sequencei

Sequence statusi: Complete.

Q5WF61-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAETKDLPFE EAMRQLEWLV EKLEEGNVPL EQAIDMFKEG MDLSQSCHEK
60 70
LLKVEKQLDQ IMHEDGELVE ANLEEEANE
Length:79
Mass (Da):9,203
Last modified:November 23, 2004 - v1
Checksum:i89C5D95FAC071FFE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006627 Genomic DNA Translation: BAD64999.1
RefSeqiWP_011247307.1, NC_006582.1

Genome annotation databases

EnsemblBacteriaiBAD64999; BAD64999; ABC2464
GeneIDi34043425
KEGGibcl:ABC2464

Similar proteinsi

Entry informationi

Entry nameiEX7S_BACSK
AccessioniPrimary (citable) accession number: Q5WF61
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: November 23, 2004
Last modified: February 28, 2018
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome