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Q5WE67 (Q5WE67_BACSK) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL BAD65343.1
Gene names
Name:ligB EMBL BAD65343.1
Ordered Locus Names:ABC2809 EMBL BAD65343.1
OrganismBacillus clausii (strain KSM-K16) [Complete proteome] [HAMAP] EMBL BAD65343.1
Taxonomic identifier66692 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length277 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL BAD65343.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5WE67 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 2C1A134D7FAFC8A3

FASTA27732,489
        10         20         30         40         50         60 
MITIFISPML LNRIDTPTEN NWLTELKFDG IRLIMSKHDG LTRLYTRHKT EVTNRFPELC 

        70         80         90        100        110        120 
NNDIADGTIL DGELIVLNDD GQPDFELVMS RFRSSKTTPL LPVQFVVFDI IKHKHTCTTA 

       130        140        150        160        170        180 
LPLIQRKEIL SKVLRPHPHM TEIKWIEGQA DAYFAAVKDR ELEGIVIKNP TSTYKINKRS 

       190        200        210        220        230        240 
DDWLKVINYQ YTQGLITGYR KDEFGLLLES FEGESWGVME HMELKQRKQF YQIAKMQNVT 

       250        260        270 
EGKQFVHLET PLPCRIRYRN LTRKGYLRIP TFVDWLI 

« Hide

References

[1]"The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KSM-K16.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006627 Genomic DNA. Translation: BAD65343.1.
RefSeqYP_176304.1. NC_006582.1.

3D structure databases

ProteinModelPortalQ5WE67.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING66692.ABC2809.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD65343; BAD65343; ABC2809.
GeneID3204073.
KEGGbcl:ABC2809.
PATRIC18925282. VBIBacCla58185_2991.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000049932.
KOK01971.
OMALYTRHNN.
OrthoDBEOG6F2971.
ProtClustDBPRK07636.

Enzyme and pathway databases

BioCycBCLA66692:GHMP-2890-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5WE67_BACSK
AccessionPrimary (citable) accession number: Q5WE67
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: April 16, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)