Q5WCG8 (Q5WCG8_BACSK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GntR family transcriptional regulator EMBL BAD65942.1

Gene names

Ordered Locus Names:

ABC3409 EMBL BAD65942.1

Organism

Bacillus clausii (strain KSM-K16) [Complete proteome] [HAMAP] EMBL BAD65942.1

Taxonomic identifier

66692 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus clausii

Protein attributes

Sequence length	122 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH gntR-type DNA-binding domain. SAAS SAAS000524 RuleBase RU000706

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS000524 RuleBase RU000706
Ligand	DNA-binding SAAS SAAS000524 RuleBase RU000706
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5WCG8 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 09C182075ED90D2C	FASTA	122	13,990
	10 20 30 40 50 60 MKSVFDDSKP IFQQISEMIA DDIVDGQLQE GDQLPSTTAL SQFYRINRAT AQKGLAALVD 70 80 90 100 110 120 GGYVYKQRGV GMFVAEGARD KLLAERKLDF HQQYVRPMLE EARRIHLPKK EIIRLIEEDY DD

References

[1]

"The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16." Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K. Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KSM-K16.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006627 Genomic DNA. Translation: BAD65942.1.
RefSeq	YP_176903.1. NC_006582.1.
3D structure databases
ProteinModelPortal	Q5WCG8.
ModBase	Search...
Protein-protein interaction databases
STRING	66692.ABC3409.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAD65942; BAD65942; ABC3409.
GeneID	3202619.
KEGG	bcl:ABC3409.
PATRIC	18926558. VBIBacCla58185_3627.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1725.
HOGENOM	HOG000259574.
OMA	SADMKIN.
Enzyme and pathway databases
BioCyc	BCLA66692:GHMP-3491-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR000524. Tscrpt_reg_HTH_GntR. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00392. GntR. 1 hit. [Graphical view]
SMART	SM00345. HTH_GNTR. 1 hit. [Graphical view]
PROSITE	PS50949. HTH_GNTR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5WCG8_BACSK

Accession

Primary (citable) accession number: Q5WCG8

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	May 29, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)