Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q5WC61 (Q5WC61_BACSK) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084
Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Name:lacA EMBL BAD66049.1
Ordered Locus Names:ABC3516
OrganismBacillus clausii (strain KSM-K16) [Complete proteome] [HAMAP]
Taxonomic identifier66692 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length682 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1561Proton donor By similarity PIRSR PIRSR001084-1
Active site3211Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1211Zinc By similarity PIRSR PIRSR001084-3
Metal binding1611Zinc By similarity PIRSR PIRSR001084-3
Metal binding1631Zinc By similarity PIRSR PIRSR001084-3
Metal binding1661Zinc By similarity PIRSR PIRSR001084-3
Binding site1171Substrate By similarity PIRSR PIRSR001084-2
Binding site1551Substrate By similarity PIRSR PIRSR001084-2
Binding site3291Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
Q5WC61 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 6216DD7CC24AF73D

FASTA68277,851
        10         20         30         40         50         60 
MKYPPVHPTV EGMMHGGDYN PDQWLHMPEI IEEDFRLMPL AHCNTFSINI FGWSAIEPEE 

        70         80         90        100        110        120 
GVYTFAWLDD IMDRLAEKGY HAILATPSGA RPAWLSKAYP EVLRVEADRR RNLHGQRHNH 

       130        140        150        160        170        180 
CLTSPVYRQK VKQINRKLAE RYKGHPALKM WHISNEYGGA CHCDYCQDAF RAWLKRRYDN 

       190        200        210        220        230        240 
RLDKLNAAWW TGFWSHTYTD WEQIESPAPH GESMIHGHNL DWKRFVTDQT IDFYRNEIEP 

       250        260        270        280        290        300 
LRELTPEIKI TTNFMGNYPH MRPFLGLNYR KFADELDVIS WDSYPGWHGE KQSTEALASD 

       310        320        330        340        350        360 
VAFVHDIYRS LKGGQPFLLM ESTPSLVNWH DVNRAKKPGM HELSSLQAVA HGADAILYFQ 

       370        380        390        400        410        420 
WRKSRGSSEK FHGAVVDHVG HEHTRVFQEV AQLGRTLEQL APVAGSTVEA DVAIIYDWEN 

       430        440        450        460        470        480 
QWAIDDAQAT NNIDKGYASQ VQSHYRSFWK HGVPVDVVSM NDDISTCKIV VAPMLYMLKP 

       490        500        510        520        530        540 
GVAEQIEAYV KNGGTFIATY WSGIVDETDL CFLGGFPGPL KPVLGVWAEE IDSLYKHETV 

       550        560        570        580        590        600 
PFTWNGDTYE AHSFIERIHL KGAETIAAFQ GGSSPTPAVT KNRLGKGTAY YMASANEQRF 

       610        620        630        640        650        660 
YDAFYELLIN EHGLASPIAA SIPTGVSVQT RTNGEYAYTF FMNFSEYEKR LTLNGEKKTI 

       670        680 
HGETINQVTL RPYGWEVVVE AI

« Hide

References

[1]"The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP006627 Genomic DNA. Translation: BAD66049.1.
RefSeqYP_177010.1. NC_006582.1.

3D structure databases

ProteinModelPortalQ5WC61.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5WC61.

Protein family/group databases

CAZyGH42. Glycoside Hydrolase Family 42.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000048408; EBBACP00000047169; EBBACG00000048399.
GeneID3204051.
GenomeReviewsGene locus ABC3516 in contig AP006627_GR.
KEGGbcl:ABC3516.
NMPDRfig|66692.3.peg.3458.
PATRIC18926796. VBIBacCla58185_3746.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1874.
GeneTreeEBGT00050000006111.
HOGENOMHBG476453.
OMAHGSDTVQ.
ProtClustDBCLSK935515.

Family and domain databases

InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5WC61_BACSK
AccessionPrimary (citable) accession number: Q5WC61
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info