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Q5WB74

- ATPF_BACSK

UniProt

Q5WB74 - ATPF_BACSK

Protein

ATP synthase subunit b

Gene

atpF

Organism
Bacillus clausii (strain KSM-K16)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 1 (23 Nov 2004)
      Previous versions | rss
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    Functioni

    F1F0 ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core and F0 containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proton translocation.UniRule annotation
    Component of the F0 channel, it forms part of the peripheral stalk, linking F1 to F0.UniRule annotation

    GO - Molecular functioni

    1. proton-transporting ATP synthase activity, rotational mechanism Source: UniProtKB-HAMAP

    GO - Biological processi

    1. plasma membrane ATP synthesis coupled proton transport Source: UniProtKB-HAMAP

    Keywords - Biological processi

    ATP synthesis, Hydrogen ion transport, Ion transport, Transport

    Enzyme and pathway databases

    BioCyciBCLA66692:GHMP-3935-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    ATP synthase subunit bUniRule annotation
    Alternative name(s):
    ATP synthase F(0) sector subunit bUniRule annotation
    ATPase subunit IUniRule annotation
    F-type ATPase subunit bUniRule annotation
    Short name:
    F-ATPase subunit bUniRule annotation
    Gene namesi
    Name:atpFUniRule annotation
    Ordered Locus Names:ABC3855
    OrganismiBacillus clausii (strain KSM-K16)
    Taxonomic identifieri66692 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000001168: Chromosome

    Subcellular locationi

    Cell membrane UniRule annotation; Single-pass membrane protein UniRule annotation

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell
    3. proton-transporting ATP synthase complex, coupling factor F(o) Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cell membrane, CF(0), Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 161161ATP synthase subunit bPRO_0000368331Add
    BLAST

    Interactioni

    Subunit structurei

    F-type ATPases have 2 components, F1 - the catalytic core - and F0 - the membrane proton channel. F1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. F0 has three main subunits: a1, b2 and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F1 is attached to F0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.UniRule annotation

    Protein-protein interaction databases

    STRINGi66692.ABC3855.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5WB74.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei2 – 2221HelicalUniRule annotationAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATPase B chain family.UniRule annotation

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG0711.
    HOGENOMiHOG000015377.
    KOiK02109.
    OMAiEDHIAGE.
    OrthoDBiEOG6DNTDK.

    Family and domain databases

    Gene3Di1.20.5.620. 1 hit.
    HAMAPiMF_01398. ATP_synth_b_bact.
    InterProiIPR028987. ATPase_B-like_membr.
    IPR002146. ATPase_F0-cplx_b/b'su_bac.
    IPR005864. ATPase_F0-cplx_bsu_bac.
    [Graphical view]
    PfamiPF00430. ATP-synt_B. 1 hit.
    [Graphical view]
    SUPFAMiSSF81573. SSF81573. 1 hit.
    TIGRFAMsiTIGR01144. ATP_synt_b. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q5WB74-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVIEWGTALY QLLAFAVLLL ILSKFALKPL LGVMQKRQDM INEQIDSAEQ    50
    NRKEAEKLLA EQREEMQKAR VEARELIENA KKAGEQQGQE MVRAAKEEAQ 100
    RIHQQALAEI QNEKDQAVAA LREQVASLSV LIAQKVIEKE LDASEQDQLV 150
    QEYLKQASEE L 161
    Length:161
    Mass (Da):18,325
    Last modified:November 23, 2004 - v1
    Checksum:i0C3C23510B5DC26E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006627 Genomic DNA. Translation: BAD66386.1.
    RefSeqiYP_177347.1. NC_006582.1.

    Genome annotation databases

    EnsemblBacteriaiBAD66386; BAD66386; ABC3855.
    GeneIDi3201742.
    KEGGibcl:ABC3855.
    PATRICi18927514. VBIBacCla58185_4105.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006627 Genomic DNA. Translation: BAD66386.1 .
    RefSeqi YP_177347.1. NC_006582.1.

    3D structure databases

    ProteinModelPortali Q5WB74.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 66692.ABC3855.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD66386 ; BAD66386 ; ABC3855 .
    GeneIDi 3201742.
    KEGGi bcl:ABC3855.
    PATRICi 18927514. VBIBacCla58185_4105.

    Phylogenomic databases

    eggNOGi COG0711.
    HOGENOMi HOG000015377.
    KOi K02109.
    OMAi EDHIAGE.
    OrthoDBi EOG6DNTDK.

    Enzyme and pathway databases

    BioCyci BCLA66692:GHMP-3935-MONOMER.

    Family and domain databases

    Gene3Di 1.20.5.620. 1 hit.
    HAMAPi MF_01398. ATP_synth_b_bact.
    InterProi IPR028987. ATPase_B-like_membr.
    IPR002146. ATPase_F0-cplx_b/b'su_bac.
    IPR005864. ATPase_F0-cplx_bsu_bac.
    [Graphical view ]
    Pfami PF00430. ATP-synt_B. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81573. SSF81573. 1 hit.
    TIGRFAMsi TIGR01144. ATP_synt_b. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of the alkaliphilic Bacillus clausii KSM-K16."
      Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y., Kawai S., Ito S., Horikoshi K.
      Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KSM-K16.

    Entry informationi

    Entry nameiATPF_BACSK
    AccessioniPrimary (citable) accession number: Q5WB74
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: November 23, 2004
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3