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Q5WA72

- PDI15_ORYSJ

UniProt

Q5WA72 - PDI15_ORYSJ

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Protein

Protein disulfide isomerase-like 1-5

Gene
PDIL1-5, PDIL3-1, Os06g0163400, LOC_Os06g06790, P0681F10.44
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis By similarity.

Catalytic activityi

Catalyzes the rearrangement of -S-S- bonds in proteins.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei97 – 971Nucleophile By similarity
Active sitei436 – 4361Nucleophile By similarity
Active sitei439 – 4391Nucleophile By similarity

GO - Molecular functioni

  1. protein disulfide isomerase activity Source: UniProtKB-EC

GO - Biological processi

  1. cell redox homeostasis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Names & Taxonomyi

Protein namesi
Recommended name:
Protein disulfide isomerase-like 1-5 (EC:5.3.4.1)
Short name:
OsPDIL1-5
Alternative name(s):
Protein disulfide isomerase-like 3-1
Short name:
OsPDIL3-1
Gene namesi
Name:PDIL1-5
Synonyms:PDIL3-1
Ordered Locus Names:Os06g0163400, LOC_Os06g06790
ORF Names:P0681F10.44
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 6

Organism-specific databases

GrameneiQ5WA72.

Subcellular locationi

GO - Cellular componenti

  1. endoplasmic reticulum lumen Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222 Reviewed predictionAdd
BLAST
Chaini23 – 533511Protein disulfide isomerase-like 1-5PRO_0000400032Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi151 – 1511N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi436 ↔ 439Redox-active By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein

Structurei

3D structure databases

ProteinModelPortaliQ5WA72.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini51 – 196146Thioredoxin 1Add
BLAST
Domaini387 – 516130Thioredoxin 2Add
BLAST

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi530 – 5334Prevents secretion from ER By similarity

Sequence similaritiesi

Contains 2 thioredoxin domains.

Keywords - Domaini

Redox-active center, Repeat, Signal

Phylogenomic databases

eggNOGiCOG0526.
KOiK09580.
OMAiPWCINCE.

Family and domain databases

Gene3Di3.40.30.10. 3 hits.
InterProiIPR012336. Thioredoxin-like_fold.
IPR013766. Thioredoxin_domain.
[Graphical view]
PfamiPF00085. Thioredoxin. 2 hits.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 4 hits.
PROSITEiPS00014. ER_TARGET. 1 hit.
PS51352. THIOREDOXIN_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5WA72-1 [UniParc]FASTAAdd to Basket

« Hide

MRARRVVAAA AVLLLFAVVA VARLDLDDDG DDSEVLDELL AVDEEEERGE    50
LGGGGEAAAA EAVRRAQSMV LVLDNDNARR AVEENAEVLL LGYAPWCERS 100
AQLMPRFAEA AAALRAMGSA VAFAKLDGER YPKAASAVGV KGFPTVLLFV 150
NGTEHQFTGL HTKDAIVTWV RKKTGAPASR IQSKDSAEEF LKKDQTFAVG 200
LFKNFEGAEY EEFVKAATSE NEVQFVETND RNVAKILFPG IASEEQFLGL 250
VKSEPEKFEK FNGAFEEKEI IQFVELNKFP LITVFTDLNS GKVYGSPIKL 300
QVFTFAEAYD FEDLESMIQE VARGFKTKIM LIYVDTAEEK LAKPFLTLYG 350
LEPEKPTVTA FDTSKGTKYL MEAEINAKNL QDFCLSLLEG TLPPYFRSEP 400
VPEEKGPIEK VVGRTFDSSV LESPQNVFLE VHAPWCVDCE AISKNVEKLA 450
KHFNDLGQTN LKFARIDASV NEHPKLQINN YPTLLLYPAQ DKSNPIKLSK 500
KSNLKDMAKF VKEKLQIADV ETVAAGDIVK DEL 533
Length:533
Mass (Da):59,032
Last modified:December 7, 2004 - v1
Checksum:iF435D08CE96793B7
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti208 – 2081A → T in AK073970. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB026295 Genomic DNA. Translation: BAD67648.1.
AP008212 Genomic DNA. Translation: BAF18810.1.
AK073970 mRNA. No translation available.
RefSeqiNP_001056896.1. NM_001063431.1.
UniGeneiOs.4371.

Genome annotation databases

EnsemblPlantsiOS06T0163400-01; OS06T0163400-01; OS06G0163400.
GeneIDi4340223.
KEGGiosa:4340223.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB026295 Genomic DNA. Translation: BAD67648.1 .
AP008212 Genomic DNA. Translation: BAF18810.1 .
AK073970 mRNA. No translation available.
RefSeqi NP_001056896.1. NM_001063431.1.
UniGenei Os.4371.

3D structure databases

ProteinModelPortali Q5WA72.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS06T0163400-01 ; OS06T0163400-01 ; OS06G0163400 .
GeneIDi 4340223.
KEGGi osa:4340223.

Organism-specific databases

Gramenei Q5WA72.

Phylogenomic databases

eggNOGi COG0526.
KOi K09580.
OMAi PWCINCE.

Family and domain databases

Gene3Di 3.40.30.10. 3 hits.
InterProi IPR012336. Thioredoxin-like_fold.
IPR013766. Thioredoxin_domain.
[Graphical view ]
Pfami PF00085. Thioredoxin. 2 hits.
[Graphical view ]
SUPFAMi SSF52833. SSF52833. 4 hits.
PROSITEi PS00014. ER_TARGET. 1 hit.
PS51352. THIOREDOXIN_2. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  4. "Phylogenetic analyses identify 10 classes of the protein disulfide isomerase family in plants, including single-domain protein disulfide isomerase-related proteins."
    Houston N.L., Fan C., Xiang J.Q., Schulze J.M., Jung R., Boston R.S.
    Plant Physiol. 137:762-778(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.
  5. "The protein disulfide isomerase gene family in bread wheat (T. aestivum L.)."
    d'Aloisio E., Paolacci A.R., Dhanapal A.P., Tanzarella O.A., Porceddu E., Ciaffi M.
    BMC Plant Biol. 10:101-101(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiPDI15_ORYSJ
AccessioniPrimary (citable) accession number: Q5WA72
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 2, 2010
Last sequence update: December 7, 2004
Last modified: May 14, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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