Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q5WA72

- PDI15_ORYSJ

UniProt

Q5WA72 - PDI15_ORYSJ

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Protein disulfide isomerase-like 1-5

Gene

PDIL1-5

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis (By similarity).By similarity

Catalytic activityi

Catalyzes the rearrangement of -S-S- bonds in proteins.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei97 – 971NucleophileBy similarity
Active sitei436 – 4361NucleophileBy similarity
Active sitei439 – 4391NucleophileBy similarity

GO - Molecular functioni

  1. protein disulfide isomerase activity Source: UniProtKB-EC

GO - Biological processi

  1. cell redox homeostasis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Enzyme and pathway databases

ReactomeiREACT_207171. XBP1(S) activates chaperone genes.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein disulfide isomerase-like 1-5 (EC:5.3.4.1)
Short name:
OsPDIL1-5
Alternative name(s):
Protein disulfide isomerase-like 3-1
Short name:
OsPDIL3-1
Gene namesi
Name:PDIL1-5
Synonyms:PDIL3-1
Ordered Locus Names:Os06g0163400, LOC_Os06g06790
ORF Names:P0681F10.44
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 6

Organism-specific databases

GrameneiQ5WA72.

Subcellular locationi

GO - Cellular componenti

  1. endoplasmic reticulum Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence AnalysisAdd
BLAST
Chaini23 – 533511Protein disulfide isomerase-like 1-5PRO_0000400032Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi151 – 1511N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi436 ↔ 439Redox-activePROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond, Glycoprotein

Expressioni

Gene expression databases

ExpressionAtlasiQ5WA72. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ5WA72.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini51 – 196146Thioredoxin 1PROSITE-ProRule annotationAdd
BLAST
Domaini387 – 516130Thioredoxin 2PROSITE-ProRule annotationAdd
BLAST

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi530 – 5334Prevents secretion from ERPROSITE-ProRule annotation

Sequence similaritiesi

Belongs to the protein disulfide isomerase family.Curated
Contains 2 thioredoxin domains.PROSITE-ProRule annotation

Keywords - Domaini

Redox-active center, Repeat, Signal

Phylogenomic databases

eggNOGiCOG0526.
InParanoidiQ5WA72.
KOiK09580.
OMAiPWCINCE.

Family and domain databases

Gene3Di3.40.30.10. 3 hits.
InterProiIPR012336. Thioredoxin-like_fold.
IPR013766. Thioredoxin_domain.
[Graphical view]
PfamiPF00085. Thioredoxin. 2 hits.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 4 hits.
PROSITEiPS00014. ER_TARGET. 1 hit.
PS51352. THIOREDOXIN_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5WA72-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRARRVVAAA AVLLLFAVVA VARLDLDDDG DDSEVLDELL AVDEEEERGE
60 70 80 90 100
LGGGGEAAAA EAVRRAQSMV LVLDNDNARR AVEENAEVLL LGYAPWCERS
110 120 130 140 150
AQLMPRFAEA AAALRAMGSA VAFAKLDGER YPKAASAVGV KGFPTVLLFV
160 170 180 190 200
NGTEHQFTGL HTKDAIVTWV RKKTGAPASR IQSKDSAEEF LKKDQTFAVG
210 220 230 240 250
LFKNFEGAEY EEFVKAATSE NEVQFVETND RNVAKILFPG IASEEQFLGL
260 270 280 290 300
VKSEPEKFEK FNGAFEEKEI IQFVELNKFP LITVFTDLNS GKVYGSPIKL
310 320 330 340 350
QVFTFAEAYD FEDLESMIQE VARGFKTKIM LIYVDTAEEK LAKPFLTLYG
360 370 380 390 400
LEPEKPTVTA FDTSKGTKYL MEAEINAKNL QDFCLSLLEG TLPPYFRSEP
410 420 430 440 450
VPEEKGPIEK VVGRTFDSSV LESPQNVFLE VHAPWCVDCE AISKNVEKLA
460 470 480 490 500
KHFNDLGQTN LKFARIDASV NEHPKLQINN YPTLLLYPAQ DKSNPIKLSK
510 520 530
KSNLKDMAKF VKEKLQIADV ETVAAGDIVK DEL
Length:533
Mass (Da):59,032
Last modified:December 7, 2004 - v1
Checksum:iF435D08CE96793B7
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti208 – 2081A → T in AK073970. (PubMed:12869764)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB026295 Genomic DNA. Translation: BAD67648.1.
AP008212 Genomic DNA. Translation: BAF18810.1.
AK073970 mRNA. No translation available.
RefSeqiNP_001056896.1. NM_001063431.1.
UniGeneiOs.4371.

Genome annotation databases

EnsemblPlantsiOS06T0163400-01; OS06T0163400-01; OS06G0163400.
GeneIDi4340223.
KEGGiosa:4340223.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB026295 Genomic DNA. Translation: BAD67648.1 .
AP008212 Genomic DNA. Translation: BAF18810.1 .
AK073970 mRNA. No translation available.
RefSeqi NP_001056896.1. NM_001063431.1.
UniGenei Os.4371.

3D structure databases

ProteinModelPortali Q5WA72.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS06T0163400-01 ; OS06T0163400-01 ; OS06G0163400 .
GeneIDi 4340223.
KEGGi osa:4340223.

Organism-specific databases

Gramenei Q5WA72.

Phylogenomic databases

eggNOGi COG0526.
InParanoidi Q5WA72.
KOi K09580.
OMAi PWCINCE.

Enzyme and pathway databases

Reactomei REACT_207171. XBP1(S) activates chaperone genes.

Gene expression databases

ExpressionAtlasi Q5WA72. baseline.

Family and domain databases

Gene3Di 3.40.30.10. 3 hits.
InterProi IPR012336. Thioredoxin-like_fold.
IPR013766. Thioredoxin_domain.
[Graphical view ]
Pfami PF00085. Thioredoxin. 2 hits.
[Graphical view ]
SUPFAMi SSF52833. SSF52833. 4 hits.
PROSITEi PS00014. ER_TARGET. 1 hit.
PS51352. THIOREDOXIN_2. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  4. "Phylogenetic analyses identify 10 classes of the protein disulfide isomerase family in plants, including single-domain protein disulfide isomerase-related proteins."
    Houston N.L., Fan C., Xiang J.Q., Schulze J.M., Jung R., Boston R.S.
    Plant Physiol. 137:762-778(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.
  5. "The protein disulfide isomerase gene family in bread wheat (T. aestivum L.)."
    d'Aloisio E., Paolacci A.R., Dhanapal A.P., Tanzarella O.A., Porceddu E., Ciaffi M.
    BMC Plant Biol. 10:101-101(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiPDI15_ORYSJ
AccessioniPrimary (citable) accession number: Q5WA72
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 2, 2010
Last sequence update: December 7, 2004
Last modified: November 26, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3