Unreviewed, UniProtKB/TrEMBL Q5W0H0 (Q5W0H0_HUMAN)

Names and origin

Protein names

Submitted name:
    Ring finger protein (C3H2C3 type) 6 (Ring finger protein (C3H2C3 type) 6, isoform CRA_a) (cDNA, FLJ92781, Homo sapiens ring finger protein (C3H2C3 type) 6 (RNF6), mRNA) EMBL CAH73183.1

Gene names

Name:	RNF6 EMBL CAH73183.1
ORF Names:	RP11-380N8.5-001 EMBL CAH73183.1, hCG_28217 EMBL EAX08380.1

Organism

Homo sapiens (Human) EMBL CAH73183.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	685 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 RING-type zinc finger. RuleBase RU000353V2

Ontologies

Keywords
Domain	Zinc-finger RuleBase RU000353V2
Ligand	Metal-binding Zinc
Gene Ontology (GO)
Molecular function	protein binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5W0H0-1 [UniParc]. Last modified May 10, 2005. Version 1. Checksum: 344584773F2E5EFC	FASTA	685	78,091
	10 20 30 40 50 60 MNQSRSRSDG GSEETLPQDH NHHENERRWQ QERLHREEAY YQFINELNDE DYRLMRDHNL 70 80 90 100 110 120 LGTPGEITSE ELQQRLDGVK EQLASQPDLR DGTNYRDSEV PRESSHEDSL LEWLNTFRRT 130 140 150 160 170 180 GNATRSGQNG NQTWRAVSRT NPNNGEFRFS LEIHVNHENR GFEIHGEDYT DIPLSDSNRD 190 200 210 220 230 240 HTANRQQRST SPVARRTRSQ TSVNFNGSSS NIPRTRLASR GQNPAEGSFS TLGRLRNGIG 250 260 270 280 290 300 GAAGIPRANA SRTNFSSHTN QSGGSELRQR EGQRFGAAHV WENGARSNVT VRNTNQRLEP 310 320 330 340 350 360 IRLRSTSNSR SRSPIQRQSG TVYHNSQRES RPVQQTTRRS VRRRGRTRVF LEQDRERERR 370 380 390 400 410 420 GTAYTPFSNS RLVSRITVEE GEESSRSSTA VRRHPTITLD LQVRRIRPGE NRDRDSIANR 430 440 450 460 470 480 TRSRVGLAEN TVTIESNSGG FRRTISRLER SGIRTYVSTI TVPLRRISEN ELVEPSSVAL 490 500 510 520 530 540 RSILRQIMTG FGELSSLMEA DSESELQRNG QHLPDMHSEL SNLGTDNNRS QHREGSSQDR 550 560 570 580 590 600 QAQGDSTEMH GENETTQPHT RNSDSRGGRQ LRNPNNLVET GTLPILRLAH FFLLNESDDD 610 620 630 640 650 660 DRIRGLTKEQ IDNLSTRHYE HNSIDSELGK ICSVCISDYV TGNKLRQLPC MHEFHIHCID 670 680 RWLSENCTCP ICRQPVLGSN IANNG

References

[1]	Tromans A. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C. Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"NEDO functional analysis of protein and research application project." Wakamatsu A., Yamamoto J., Kimura K., Kaida T., Tsuchiya K., Iida Y., Takayama Y., Murakawa K., Kanehori K., Andoh T., Kagawa N., Sato R., Kawamura Y., Tanaka S., Kisu Y., Sugano S., Goshima N., Nomura N., Isogai T. Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Brain EMBL BAG35344.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AK312435 mRNA. Translation: BAG35344.1. AL138966 Genomic DNA. Translation: CAH73183.1. CH471075 Genomic DNA. Translation: EAX08380.1.
RefSeq	NP_005968.1. NP_898864.1. NP_898865.1.
UniGene	Hs.136885
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSG00000127870. Homo sapiens. [Contig view]
GeneID	6049.
KEGG	hsa:6049.
Organism-specific databases
HGNC	HGNC:10069. RNF6.
GenAtlas	Search...
GeneCards	Search...
Phylogenomic databases
HOVERGEN	Q5W0H0.
Gene expression databases
ArrayExpress	Q5W0H0.
Family and domain databases
InterPro	IPR001841. Znf_RING. IPR013083. Znf_RING/FYVE/PHD. [Graphical view]
Gene3D	G3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
SMART	SM00184. RING. 1 hit. [Graphical view]
PROSITE	PS50089. ZF_RING_2. 1 hit. [Graphical view]
Other Resources
NextBio	23569.

Entry information

Entry name

Q5W0H0_HUMAN

Accession

Primary (citable) accession number: Q5W0H0

Entry history

Integrated into UniProtKB/TrEMBL:	May 10, 2005
Last sequence update:	May 10, 2005
Last modified:	November 25, 2008
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)