Unreviewed, UniProtKB/TrEMBL Q5W009 (Q5W009_HUMAN)

Names and origin

Protein names

Submitted name:
    Putative uncharacterized protein EMBL AAQ09533.1
Submitted name:
    RNA binding motif protein 17 EMBL CAH73602.1
    RNA binding motif protein 17, isoform CRA_a EMBL EAW86405.1
    cDNA, FLJ95864 EMBL BAG37457.1

Gene names

Name:	RBM17 EMBL CAH73602.1
ORF Names:	RP11-414H17.9-003 EMBL CAH73602.1, hCG_24832 EMBL EAW86405.1

Organism

Homo sapiens (Human) EMBL CAH73602.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	401 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	nucleic acid binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5W009-1 [UniParc]. Last modified May 10, 2005. Version 1. Checksum: 99FA8C5E5E998554	FASTA	401	44,962
	10 20 30 40 50 60 MSLYDDLGVE TSDSKTEGWS KNFKLLQSQL QVKKAALTQA KSQRTKQSTV LAPVIDLKRG 70 80 90 100 110 120 GSSDDRQIVD TPPHVAAGLK DPVPSGFSAG EVLIPLADEY DPMFPNDYEK VVKRQREERQ 130 140 150 160 170 180 RQRELERQKE IEEREKRRKD RHEASGFARR PDPDSDEDED YERERRKRSM GGAAIAPPTS 190 200 210 220 230 240 LVEKDKELPR DFPYEEDSRP RSQSSKAAIP PPVYEEQDRP RSPTGPSNSF LANMGGTVAH 250 260 270 280 290 300 KIMQKYGFRE GQGLGKHEQG LSTALSVEKT SKRGGKIIVG DATEKDASKK SDSNPLTEIL 310 320 330 340 350 360 KCPTKVVLLR NMVGAGEVDE DLEVETKEEC EKYGKVGKCV IFEIPGAPDD EAVRIFLEFE 370 380 390 400 RVESAIKAVV DLNGRYFGGR VVKACFYNLD KFRVLDLAEQ V

References

[1]	Tracey A. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"NEDO functional analysis of protein and research application project." Wakamatsu A., Yamamoto J., Kimura K., Kaida T., Tsuchiya K., Iida Y., Takayama Y., Murakawa K., Kanehori K., Andoh T., Kagawa N., Sato R., Kawamura Y., Tanaka S., Kisu Y., Sugano S., Goshima N., Nomura N., Isogai T. Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	"Cloning and characterization of a novel human gene with G-patch Domain, prf:D111_DOMAIN,RNA recognition motif." Zhang D.L., Cai J.J., Ma D.L. Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF542550 mRNA. Translation: AAQ09533.1. AK314952 mRNA. Translation: BAG37457.1. AL157395 Genomic DNA. Translation: CAH73602.1. CH471072 Genomic DNA. Translation: EAW86405.1.
RefSeq	NP_116294.1.
UniGene	Hs.498548
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSG00000134453. Homo sapiens. [Contig view]
GeneID	84991.
KEGG	hsa:84991.
Organism-specific databases
HGNC	HGNC:16944. RBM17.
GenAtlas	Search...
GeneCards	Search...
Phylogenomic databases
HOVERGEN	Q5W009.
Gene expression databases
ArrayExpress	Q5W009.
Family and domain databases
InterPro	IPR012677. a_b_plait_nuc_bd. IPR000467. G_patch. IPR003954. RRM_1. IPR000504. RRM_RNP1. IPR016967. Splicing_factor_SPF45. [Graphical view]
Gene3D	G3DSA:3.30.70.330. a_b_plait_nuc_bd. 1 hit.
Pfam	PF01585. G-patch. 1 hit. PF00076. RRM_1. 1 hit. [Graphical view]
PIRSF	PIRSF031066. Splicing_factor_SPF45. 1 hit.
SMART	SM00443. G_patch. 1 hit. SM00361. RRM_1. 1 hit. [Graphical view]
PROSITE	PS50174. G_PATCH. 1 hit. [Graphical view]
Other Resources
NextBio	75577.

Entry information

Entry name

Q5W009_HUMAN

Accession

Primary (citable) accession number: Q5W009

Entry history

Integrated into UniProtKB/TrEMBL:	May 10, 2005
Last sequence update:	May 10, 2005
Last modified:	November 25, 2008
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)