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Q5VWN6 (F208B_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein FAM208B
Gene names
Name:FAM208B
Synonyms:C10orf18, KIAA2006
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length2430 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the FAM208 family.

Sequence caution

The sequence BAA91115.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

The sequence BAB14336.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

The sequence BAB14993.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

The sequence BAC87251.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

Ontologies

Keywords
   Coding sequence diversityAlternative splicing
Polymorphism
   PTMPhosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Alternative products

This entry describes 2 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q5VWN6-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 (identifier: Q5VWN6-2)

The sequence of this isoform differs from the canonical sequence as follows:
     333-1137: Missing.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 24302430Protein FAM208B
PRO_0000299542

Amino acid modifications

Modified residue3841Phosphoserine Ref.7
Modified residue4441Phosphoserine Ref.5
Modified residue6851Phosphoserine Ref.6
Modified residue10871Phosphoserine Ref.6
Modified residue11721Phosphoserine Ref.6
Modified residue12681Phosphoserine Ref.6
Modified residue15411Phosphoserine Ref.8
Modified residue20111Phosphothreonine Ref.8

Natural variations

Alternative sequence333 – 1137805Missing in isoform 2.
VSP_027733
Natural variant4991C → G.
Corresponds to variant rs2254067 [ dbSNP | Ensembl ].
VAR_050848
Natural variant6301A → D.
Corresponds to variant rs4748636 [ dbSNP | Ensembl ].
VAR_050849
Natural variant7241S → Y.
Corresponds to variant rs56856085 [ dbSNP | Ensembl ].
VAR_061601
Natural variant8071I → V.
Corresponds to variant rs45575338 [ dbSNP | Ensembl ].
VAR_061602
Natural variant10751R → P. Ref.2
Corresponds to variant rs2797491 [ dbSNP | Ensembl ].
VAR_034838
Natural variant12061V → M.
Corresponds to variant rs3814196 [ dbSNP | Ensembl ].
VAR_050850
Natural variant15781P → S.
Corresponds to variant rs17143175 [ dbSNP | Ensembl ].
VAR_050851
Natural variant16791V → A. Ref.2 Ref.3 Ref.4
Corresponds to variant rs2669142 [ dbSNP | Ensembl ].
VAR_034839
Natural variant17821T → I.
Corresponds to variant rs11593253 [ dbSNP | Ensembl ].
VAR_050852
Natural variant22881K → R.
Corresponds to variant rs2275774 [ dbSNP | Ensembl ].
VAR_050853
Natural variant24041S → N. Ref.2 Ref.3 Ref.4
Corresponds to variant rs2797501 [ dbSNP | Ensembl ].
VAR_034840

Experimental info

Sequence conflict18851W → R in BAA91115. Ref.3
Sequence conflict20431V → A in BAA91115. Ref.3
Sequence conflict20651S → I in BAA91115. Ref.3
Sequence conflict23591Q → R in BAB14993. Ref.3
Sequence conflict23841A → T in BAB14993. Ref.3

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified December 7, 2004. Version 1.
Checksum: 8A6A94D318280DCE

FASTA2,430268,843
        10         20         30         40         50         60 
MAPPAHKSIL ERSENVLMSP WKGKLIVQDR MLCDIALWST YGAMIPTQLP QELDFKYVMK 

        70         80         90        100        110        120 
VSSLKKRLPE AAFRKQNYLE EKVCFQDLCF NLYEVELSNR QGENIDKLTE CIKNKQLAII 

       130        140        150        160        170        180 
KCLEDRGFFI LLTSSALLSE PDFGGKQMGL HGLHLFRSPL STGVKDLKVE DDISMKVIPI 

       190        200        210        220        230        240 
LSTLNCALLE TKKSLPEERI HPNTLVKRHF QELYKADRSP SLSVAPQDRM KDPTFLGKLP 

       250        260        270        280        290        300 
SGFDLIPPAE KCPSESLTQL NSYFSDPSAY ILEVSTALDL LAEHPQSPCV SDGICDAGFS 

       310        320        330        340        350        360 
LVMTPDPEFL VSEAEVRKET ETKKDSEEML KAKKRVFPLS PASNLRVQPK RKASMPHMVQ 

       370        380        390        400        410        420 
SKKVNLCRPF PKRTASRADN SSDSPTTLKL VKGQFPQKRK RGAEVLTAQF VQKTKLDRKN 

       430        440        450        460        470        480 
QEAPISKDVP VPTNAKRARK QEKSPVKTVP RAKPPVKKSP QKQRVNIVKG NENPRNRKQL 

       490        500        510        520        530        540 
QPVKGETASK LQSEISRGCQ EDGISINSVQ PENTTAAHND LPENSIVNYD SQALNMLADL 

       550        560        570        580        590        600 
ALSSATSSTP VSEARNLHCS SELPQNDVLL SKENSLRGTS DHEYHRGVKT QKGELLPNPS 

       610        620        630        640        650        660 
SDRKSNSGSD LTVSQDEESL VPCSQAPAKA QSALTEEMLE SSDASQSSSV SVEHSYALLL 

       670        680        690        700        710        720 
TEHSKKHLQE REILSPLFPR NGTKSPEAAT PVGKVMPFRH QPGLLLQQKP PDDPVVKPKD 

       730        740        750        760        770        780 
RPPSARVKKS SCSRIVLSCD DSVKITFKCE TEYAFSLDSK YTNNPLEKTV VRALHGPWNT 

       790        800        810        820        830        840 
DLPDNVEEVK LLLHMWVALF YSNQNKIIRS SRKVVEHSNP AKYVSINSTL ESCELREIEE 

       850        860        870        880        890        900 
SLGLEKCSAD SLLETNEISR AHAAEVSFRD PNCLLPFIKT PLTQGLELCV QNEQKKTFAR 

       910        920        930        940        950        960 
ECDPDTQEDQ NFICSYNNEV TGEEAKQESL ETSNLVLSGI GSTQTNGPSV PSEEEIVQPL 

       970        980        990       1000       1010       1020 
DSTRVASYSG TVTQATFTRT YDGPGSQPVI CQSSVYGTLE NKVDILDAAV QTKTGTLQDL 

      1030       1040       1050       1060       1070       1080 
IQHGSPINNE CHPSLERKDD NMGCAVINPE PITLTFEKNA HVPIQTEGVN TADERTTFKK 

      1090       1100       1110       1120       1130       1140 
ELIKQVSPAA SLRHPVSTSE NARTQGLRDI PSLVVAGQKG TKYLCASSVG GETLDKAVCS 

      1150       1160       1170       1180       1190       1200 
LQKETPLPVS LPSDKTMVME ALSLAKSSSH LSPSEEVRCT QDFLSQTQSL LGLSSEGLLE 

      1210       1220       1230       1240       1250       1260 
LTQVEVDSSS ASTTLGRQCS LNCISSGCHT SGDSLELRKN HKNGPNTENM NLEAFDSVFI 

      1270       1280       1290       1300       1310       1320 
KQTSLSVSRE VSLELSEEDS DIDLALTISP PTSPREEMPA GEIEQFEEAP FSNLELQDVA 

      1330       1340       1350       1360       1370       1380 
EEIGEPEEVA LTESREVSSA DNVSVYPSVS EEPVENKERK GDNLQPVTLI LSKENCTLEI 

      1390       1400       1410       1420       1430       1440 
AEEINVTSDF PFDSVIEEVS PASSPEPPVP VKETRPYQAV TPCILKLHGT QCEKSNQISQ 

      1450       1460       1470       1480       1490       1500 
CESEDLGITE KENVFVGPTH PVGQDNFTQV QQMQVSAEMP LILTDHPGRT GRPTLPGKVT 

      1510       1520       1530       1540       1550       1560 
EEIVSSEHDE GLSFSGKVQC YGRELNQPAS AAKCTGDFSP SPEKLVKSGN PLQPVSIENR 

      1570       1580       1590       1600       1610       1620 
NLDLKHLVLE SSEPPFGPRN VIENKSLSDT LVSTTAPSGI VNVSVKQQTS PKSSQNHLFP 

      1630       1640       1650       1660       1670       1680 
GDLKTDEGIY LQVKSLTAAS VDGAYSTQGC MCSVVPTLCS SSDNATLTHY VRPINAEPVF 

      1690       1700       1710       1720       1730       1740 
QAQEIPAGRM ASLLKNGEPE AELHKETTGP GTAGPQSNTT SSLKGERKAI HTLQDVSTCE 

      1750       1760       1770       1780       1790       1800 
TKELLNVGVS SLCAGPYQNT ADTKENLSKE PLASFVSESF DTSVCGIATE HVEIENSGEG 

      1810       1820       1830       1840       1850       1860 
LRAEAGSETL GRDGEVGVNS DMHYELSGDS DLDLLGDCRN PRLDLEDSYT LRGSYTRKKD 

      1870       1880       1890       1900       1910       1920 
VPTDGYESSL NFHNNNQEDW GCSSWVPGME TSLPPGHWTA AVKKEEKCVP PYVQIRDLHG 

      1930       1940       1950       1960       1970       1980 
ILRTYANFSI TKELKDTMRT SHGLRRHPSF SANCGLPSSW TSTWQVADDL TQNTLDLEYL 

      1990       2000       2010       2020       2030       2040 
RFAHKLKQTI KNGDSQHSAS SANVFPKESP TQISIGAFPS TKISEAPFLH PAPRSRSPLL 

      2050       2060       2070       2080       2090       2100 
VTVVESDPRP QGQPRRGYTA SSLDSSSSWR ERCSHNRDLR NSQRNHTVSF HLNKLKYNST 

      2110       2120       2130       2140       2150       2160 
VKESRNDISL ILNEYAEFNK VMKNSNQFIF QDKELNDVSG EATAQEMYLP FPGRSASYED 

      2170       2180       2190       2200       2210       2220 
IIIDVCTNLH VKLRSVVKEA CKSTFLFYLV ETEDKSFFVR TKNLLRKGGH TEIEPQHFCQ 

      2230       2240       2250       2260       2270       2280 
AFHRENDTLI IIIRNEDISS HLHQIPSLLK LKHFPSVIFA GVDSPGDVLD HTYQELFRAG 

      2290       2300       2310       2320       2330       2340 
GFVISDDKIL EAVTLVQLKE IIKILEKLNG NGRWKWLLHY RENKKLKEDE RVDSTAHKKN 

      2350       2360       2370       2380       2390       2400 
IMLKSFQSAN IIELLHYHQC DSRSSTKAEI LKCLLNLQIQ HIDARFAVLL TDKPTIPREV 

      2410       2420       2430 
FENSGILVTD VNNFIENIEK IAAPFRSSYW 

« Hide

Isoform 2 [UniParc].

Checksum: 633F6CEAFB1585AB
Show »

FASTA1,625180,380

References

[1]"The DNA sequence and comparative analysis of human chromosome 10."
Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. expand/collapse author list , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R.M., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
Nature 429:375-381(2004) [PubMed: 15164054] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"The nucleotide sequence of a long cDNA clone isolated from human."
Nagase T., Kikuno R., Ohara O.
Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 259-2430 (ISOFORM 2), VARIANTS PRO-1075; ALA-1679 AND ASN-2404.
Tissue: Brain.
[3]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 701-2430, VARIANTS ALA-1679 AND ASN-2404.
Tissue: Testis.
[4]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1662-2430, VARIANTS ALA-1679 AND ASN-2404.
Tissue: Blood and Eye.
[5]"Global, in vivo, and site-specific phosphorylation dynamics in signaling networks."
Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M.
Cell 127:635-648(2006) [PubMed: 17081983] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-444, MASS SPECTROMETRY.
Tissue: Cervix carcinoma.
[6]"Evaluation of the low-specificity protease elastase for large-scale phosphoproteome analysis."
Wang B., Malik R., Nigg E.A., Korner R.
Anal. Chem. 80:9526-9533(2008) [PubMed: 19007248] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-685; SER-1087; SER-1172 AND SER-1268, MASS SPECTROMETRY.
Tissue: Cervix carcinoma.
[7]"A quantitative atlas of mitotic phosphorylation."
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P.
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-384, MASS SPECTROMETRY.
Tissue: Cervix carcinoma.
[8]"Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach."
Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.
Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1541 AND THR-2011, MASS SPECTROMETRY.
Tissue: Embryonic kidney.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL365356, AL596094 Genomic DNA. Translation: CAH72616.1.
AL365356, AL596094 Genomic DNA. Translation: CAH72617.1.
AL596094, AL365356 Genomic DNA. Translation: CAI13368.1.
AL596094, AL365356 Genomic DNA. Translation: CAI13367.1.
AB095927 mRNA. Translation: BAC23103.1.
AK000367 mRNA. Translation: BAA91115.1. Different initiation.
AK022966 mRNA. Translation: BAB14336.1. Different initiation.
AK024762 mRNA. Translation: BAB14993.1. Different initiation.
AK027014 mRNA. Translation: BAB15627.1.
AK128051 mRNA. Translation: BAC87251.1. Different initiation.
BC001759 mRNA. Translation: AAH01759.2.
BC110339 mRNA. Translation: AAI10340.1.
IPIIPI00479893.
IPI00848276.
RefSeqNP_060252.4. NM_017782.4.
UniGeneHs.432548.
Hs.610717.

3D structure databases

ProteinModelPortalQ5VWN6.
ModBaseSearch...

Protein-protein interaction databases

IntActQ5VWN6. 5 interactions.
MINTMINT-7032141.

PTM databases

PhosphoSiteQ5VWN6.

Polymorphism databases

DMDM74747424.

Proteomic databases

PRIDEQ5VWN6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000328090; ENSP00000328426; ENSG00000108021.
ENST00000380270; ENSP00000369623; ENSG00000108021.
GeneID54906.
KEGGhsa:54906.
UCSCuc001iij.2. human.

Organism-specific databases

CTD54906.
GeneCardsGC10P005726.
HGNCHGNC:23484. FAM208B.
HPAHPA038042.
HPA038043.
neXtProtNX_Q5VWN6.
HUGESearch...
GenAtlasSearch...

Phylogenomic databases

HOVERGENHBG095571.
InParanoidQ5VWN6.
OMANTLDLEY.
OrthoDBEOG4FTVZN.

Gene expression databases

ArrayExpressQ5VWN6.
BgeeQ5VWN6.
CleanExHS_C10orf18.
GenevestigatorQ5VWN6.

Family and domain databases

InterProIPR022168. DUF3699.
IPR022188. DUF3715.
[Graphical view]
PfamPF12480. DUF3699. 2 hits.
PF12509. DUF3715. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio57950.

Entry information

Entry nameF208B_HUMAN
AccessionPrimary (citable) accession number: Q5VWN6
Secondary accession number(s): Q2YD91 expand/collapse secondary AC list , Q5VWN5, Q6ZRQ8, Q8IVG4, Q9BUZ7, Q9H5J9, Q9H7A4, Q9H996, Q9NXA1
Entry history
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: December 7, 2004
Last modified: January 25, 2012
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 10

Human chromosome 10: entries, gene names and cross-references to MIM

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

SIMILARITY comments

Index of protein domains and families