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Q5VUE5

- CA053_HUMAN

UniProt

Q5VUE5 - CA053_HUMAN

Protein

Uncharacterized protein C1orf53

Gene

C1orf53

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein C1orf53
    Gene namesi
    Name:C1orf53
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 1

    Organism-specific databases

    HGNCiHGNC:30003. C1orf53.

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA142672504.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 145145Uncharacterized protein C1orf53PRO_0000271012Add
    BLAST

    Proteomic databases

    MaxQBiQ5VUE5.
    PaxDbiQ5VUE5.
    PRIDEiQ5VUE5.

    Expressioni

    Tissue specificityi

    Expressed in retina and retinoblastoma.1 Publication

    Gene expression databases

    BgeeiQ5VUE5.
    CleanExiHS_C1orf53.
    GenevestigatoriQ5VUE5.

    Interactioni

    Protein-protein interaction databases

    BioGridi132826. 1 interaction.
    STRINGi9606.ENSP00000356363.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5VUE5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG73756.
    HOGENOMiHOG000010300.
    HOVERGENiHBG079906.
    InParanoidiQ5VUE5.
    OMAiCPYGHVN.
    OrthoDBiEOG7TJ3KD.
    PhylomeDBiQ5VUE5.
    TreeFamiTF313973.

    Sequencei

    Sequence statusi: Complete.

    Q5VUE5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAARQIWART GAALCRQPSA APPPAPLWVR AGFRQQLSLT LCPANEGNCG    50
    GSAPSTPGRP ERAARPSVSE ELTAAERQIA ELHAAACAAG QLNYVDPATG 100
    YVVLTQIAHL QRGECCGSAC RHCPYGQVNV KDPSKKKQFN SYFYV 145
    Length:145
    Mass (Da):15,483
    Last modified:December 7, 2004 - v1
    Checksum:iC5475E4B4073223A
    GO

    Sequence cautioni

    The sequence CAH71759.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL590115 Genomic DNA. Translation: CAH71758.1.
    AL590115 Genomic DNA. Translation: CAH71759.1. Sequence problems.
    BC038214 mRNA. No translation available.
    BC130608 mRNA. Translation: AAI30609.1.
    BC130634 mRNA. Translation: AAI30635.1.
    CCDSiCCDS44290.1.
    RefSeqiNP_001019765.1. NM_001024594.2.
    UniGeneiHs.61329.

    Genome annotation databases

    EnsembliENST00000367393; ENSP00000356363; ENSG00000203724.
    GeneIDi388722.
    KEGGihsa:388722.
    UCSCiuc001guh.3. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL590115 Genomic DNA. Translation: CAH71758.1 .
    AL590115 Genomic DNA. Translation: CAH71759.1 . Sequence problems.
    BC038214 mRNA. No translation available.
    BC130608 mRNA. Translation: AAI30609.1 .
    BC130634 mRNA. Translation: AAI30635.1 .
    CCDSi CCDS44290.1.
    RefSeqi NP_001019765.1. NM_001024594.2.
    UniGenei Hs.61329.

    3D structure databases

    ProteinModelPortali Q5VUE5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 132826. 1 interaction.
    STRINGi 9606.ENSP00000356363.

    Proteomic databases

    MaxQBi Q5VUE5.
    PaxDbi Q5VUE5.
    PRIDEi Q5VUE5.

    Protocols and materials databases

    DNASUi 388722.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000367393 ; ENSP00000356363 ; ENSG00000203724 .
    GeneIDi 388722.
    KEGGi hsa:388722.
    UCSCi uc001guh.3. human.

    Organism-specific databases

    CTDi 388722.
    GeneCardsi GC01P197871.
    H-InvDB HIX0029272.
    HGNCi HGNC:30003. C1orf53.
    neXtProti NX_Q5VUE5.
    PharmGKBi PA142672504.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG73756.
    HOGENOMi HOG000010300.
    HOVERGENi HBG079906.
    InParanoidi Q5VUE5.
    OMAi CPYGHVN.
    OrthoDBi EOG7TJ3KD.
    PhylomeDBi Q5VUE5.
    TreeFami TF313973.

    Miscellaneous databases

    GenomeRNAii 388722.
    NextBioi 102320.

    Gene expression databases

    Bgeei Q5VUE5.
    CleanExi HS_C1orf53.
    Genevestigatori Q5VUE5.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence and biological annotation of human chromosome 1."
      Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
      , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.
      Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Brain.
    3. "KIF14 is a candidate oncogene in the 1q minimal region of genomic gain in multiple cancers."
      Corson T.W., Huang A., Tsao M.-S., Gallie B.L.
      Oncogene 24:4741-4753(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: TISSUE SPECIFICITY.

    Entry informationi

    Entry nameiCA053_HUMAN
    AccessioniPrimary (citable) accession number: Q5VUE5
    Secondary accession number(s): A1L4N2, Q5VUE4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 9, 2007
    Last sequence update: December 7, 2004
    Last modified: October 1, 2014
    This is version 65 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 1
      Human chromosome 1: entries, gene names and cross-references to MIM

    External Data

    Dasty 3