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Q5VUE5

- CA053_HUMAN

UniProt

Q5VUE5 - CA053_HUMAN

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Protein

Uncharacterized protein C1orf53

Gene

C1orf53

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C1orf53
Gene namesi
Name:C1orf53
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 1

Organism-specific databases

HGNCiHGNC:30003. C1orf53.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA142672504.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 145145Uncharacterized protein C1orf53PRO_0000271012Add
BLAST

Proteomic databases

MaxQBiQ5VUE5.
PaxDbiQ5VUE5.
PRIDEiQ5VUE5.

Expressioni

Tissue specificityi

Expressed in retina and retinoblastoma.1 Publication

Gene expression databases

BgeeiQ5VUE5.
CleanExiHS_C1orf53.
GenevestigatoriQ5VUE5.

Interactioni

Protein-protein interaction databases

BioGridi132826. 1 interaction.
STRINGi9606.ENSP00000356363.

Structurei

3D structure databases

ProteinModelPortaliQ5VUE5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG73756.
GeneTreeiENSGT00390000016548.
HOGENOMiHOG000010300.
HOVERGENiHBG079906.
InParanoidiQ5VUE5.
OMAiCPYGHVN.
OrthoDBiEOG7TJ3KD.
PhylomeDBiQ5VUE5.
TreeFamiTF313973.

Sequencei

Sequence statusi: Complete.

Q5VUE5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAARQIWART GAALCRQPSA APPPAPLWVR AGFRQQLSLT LCPANEGNCG
60 70 80 90 100
GSAPSTPGRP ERAARPSVSE ELTAAERQIA ELHAAACAAG QLNYVDPATG
110 120 130 140
YVVLTQIAHL QRGECCGSAC RHCPYGQVNV KDPSKKKQFN SYFYV
Length:145
Mass (Da):15,483
Last modified:December 7, 2004 - v1
Checksum:iC5475E4B4073223A
GO

Sequence cautioni

The sequence CAH71759.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL590115 Genomic DNA. Translation: CAH71758.1.
AL590115 Genomic DNA. Translation: CAH71759.1. Sequence problems.
BC038214 mRNA. No translation available.
BC130608 mRNA. Translation: AAI30609.1.
BC130634 mRNA. Translation: AAI30635.1.
CCDSiCCDS44290.1.
RefSeqiNP_001019765.1. NM_001024594.2.
UniGeneiHs.61329.

Genome annotation databases

EnsembliENST00000367393; ENSP00000356363; ENSG00000203724.
GeneIDi388722.
KEGGihsa:388722.
UCSCiuc001guh.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL590115 Genomic DNA. Translation: CAH71758.1 .
AL590115 Genomic DNA. Translation: CAH71759.1 . Sequence problems.
BC038214 mRNA. No translation available.
BC130608 mRNA. Translation: AAI30609.1 .
BC130634 mRNA. Translation: AAI30635.1 .
CCDSi CCDS44290.1.
RefSeqi NP_001019765.1. NM_001024594.2.
UniGenei Hs.61329.

3D structure databases

ProteinModelPortali Q5VUE5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 132826. 1 interaction.
STRINGi 9606.ENSP00000356363.

Proteomic databases

MaxQBi Q5VUE5.
PaxDbi Q5VUE5.
PRIDEi Q5VUE5.

Protocols and materials databases

DNASUi 388722.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000367393 ; ENSP00000356363 ; ENSG00000203724 .
GeneIDi 388722.
KEGGi hsa:388722.
UCSCi uc001guh.3. human.

Organism-specific databases

CTDi 388722.
GeneCardsi GC01P197871.
H-InvDB HIX0029272.
HGNCi HGNC:30003. C1orf53.
neXtProti NX_Q5VUE5.
PharmGKBi PA142672504.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG73756.
GeneTreei ENSGT00390000016548.
HOGENOMi HOG000010300.
HOVERGENi HBG079906.
InParanoidi Q5VUE5.
OMAi CPYGHVN.
OrthoDBi EOG7TJ3KD.
PhylomeDBi Q5VUE5.
TreeFami TF313973.

Miscellaneous databases

GenomeRNAii 388722.
NextBioi 102320.

Gene expression databases

Bgeei Q5VUE5.
CleanExi HS_C1orf53.
Genevestigatori Q5VUE5.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence and biological annotation of human chromosome 1."
    Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
    , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.
    Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Brain.
  3. "KIF14 is a candidate oncogene in the 1q minimal region of genomic gain in multiple cancers."
    Corson T.W., Huang A., Tsao M.-S., Gallie B.L.
    Oncogene 24:4741-4753(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY.

Entry informationi

Entry nameiCA053_HUMAN
AccessioniPrimary (citable) accession number: Q5VUE5
Secondary accession number(s): A1L4N2, Q5VUE4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: December 7, 2004
Last modified: October 29, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM

External Data

Dasty 3