Q5VN06 (Q5VN06_ORYSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Os06g0275500 protein EMBL BAF19293.1

Submitted name:
Putative Polycomb protein EZ1 EMBL BAD69169.1

Gene names

Name:	P0676F10.40 EMBL BAD69169.1
Synonyms:	P0038C05.29 EMBL BAD68028.1
Ordered Locus Names:	Os06g0275500 EMBL BAF19293.1

Organism

Oryza sativa subsp. japonica (Rice) [Reference proteome]

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza › Oryza sativa

Protein attributes

Sequence length	896 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 SET domain. SAAS SAAS001214 RuleBase RU004538

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA mediated transformation Inferred from electronic annotation. Source: EnsemblPlants/Gramene histone methylation Inferred from electronic annotation. Source: EnsemblPlants/Gramene leaf morphogenesis Inferred from electronic annotation. Source: EnsemblPlants/Gramene negative regulation of molecular function, epigenetic Inferred from electronic annotation. Source: EnsemblPlants/Gramene regulation of gene expression by genetic imprinting Inferred from electronic annotation. Source: EnsemblPlants/Gramene vegetative to reproductive phase transition of meristem Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Cellular_component	PcG protein complex Inferred from electronic annotation. Source: InterPro
Molecular_function	chromatin binding Inferred from electronic annotation. Source: InterPro single-stranded RNA binding Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5VN06 [UniParc]. Last modified December 7, 2004. Version 1. Checksum: 7DCE38E04E7505DF	FASTA	896	100,296
	10 20 30 40 50 60 MAGDSRNEPM FCEEGSSESG YVLCVIDSLK KKITSDRFVY IQKRVEENSI KLSPITLHSH 70 80 90 100 110 120 NLSKNRQTST SNSTDLVSNL LTKRKEDALC AVNSRESSPD ESEGANCQDE CSSTVIVGGN 130 140 150 160 170 180 LSARNSVRPI RLPEVATLPP YTTWIFLDRN QRMQEDQSVL GRRRIYYDTN CGEALICSDS 190 200 210 220 230 240 EDEAVEDEEE KKEFKDSEDC IIRMTIQECG MSDAVLETLA RDIERAPDDI KARYEILQGE 250 260 270 280 290 300 KPEGSSKKVS ELNVKMEDVY GDKDLDAALD SFDNLFCRRC LVFDCKLHGC SQDLVFPTEK 310 320 330 340 350 360 QAPLCSSDEG TPCGIHCYKL VSKPDAIMEI DSHLLVDVEE PTSDNLKDQI GSNKKKLGSS 370 380 390 400 410 420 GQKTKSQQSE SSSTARVSSE SSESEVQLLS NKSPQHSPGL SKNKLGAKGG IKKSTNRRIA 430 440 450 460 470 480 ERILMSVKKG QQEMSPDSNS IVNGCHWPRD MKLRSDTRSG IKDSVVSSQC NSPSTRSFRK 490 500 510 520 530 540 KGTLQMENNS SFVDAQSDSM EDTNNEHSAT DGCDSSRKEE CVDESICRQE AHGRSWKVIE 550 560 570 580 590 600 QGLLLKGLEI FGKNSCLIAR NLLGGMKTCT DVFQYMNYIE NSSASGALSG VDSLVKGYMK 610 620 630 640 650 660 GNELRTRSRF VRRRGRVRRL KYTWKTAGYH FIRKRITERK DQPCRQYTPC GCQSACGKQC 670 680 690 700 710 720 PCLTNGTCCE KYCGCPKMCK NRFRGCHCAK SQCRSRQCPC FAADRECDPD VCRNCWVGCG 730 740 750 760 770 780 DGTLGVPNQR GDNYECRNMK LLLKQQQRVL LGRSDVSGWG AFLKNSVGKH EYLGEYTGEL 790 800 810 820 830 840 ISHKEADKRG KIYDRENSSF LFNLNNEYVL DAYRMGDKLK FANHSPDPNC YAKVIMVAGD 850 860 870 880 890 HRVGIFAKER ISAGEELFYD YRYEPDRAPA WARKPEGPGA KDDAQPSTGR AKKLAH

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Oryza sativa nipponbare(GA3) genomic DNA, chromosome 6, PAC clone:P0038C05." Sasaki T., Matsumoto T., Yamamoto K. Submitted (DEC-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Oryza sativa nipponbare(GA3) genomic DNA, chromosome 6, PAC clone:P0676F10." Sasaki T., Matsumoto T., Yamamoto K. Submitted (OCT-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[4]	"The map-based sequence of the rice genome." International Rice Genome Sequencing Project Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N., Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y., Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N. , Fukunaka R., Hamada M., Harada C., Hayashi A., Hijishita S., Honda M., Hosokawa S., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito K., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Kurita K., Katagiri S., Kikuta A., Kobayashi H., Kobayashi N., Machita K., Maehara T., Masukawa M., Mizubayashi T., Mukai Y., Nagasaki H., Nagata Y., Naito S., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Meguro A., Negishi M., Ohta I., Ohta T., Okamoto M., Ono N., Saji S., Sakaguchi M., Sakai K., Shibata M., Shimokawa T., Song J., Takazaki Y., Terasawa K., Tsugane M., Tsuji K., Ueda S., Waki K., Yamagata H., Yamamoto M., Yamamoto S., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Yano M., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K., Moffat K., Hill J., Bera J., Fadrosh D., Jin S., Johri S., Kim M., Overton L., Reardon M., Tsitrin T., Vuong H., Weaver B., Ciecko A., Tallon L., Jackson J., Pai G., Aken S.V., Utterback T., Reidmuller S., Feldblyum T., Hsiao J., Zismann V., Iobst S., de Vazeille A.R., Buell C.R., Ying K., Li Y., Lu T., Huang Y., Zhao Q., Feng Q., Zhang L., Zhu J., Weng Q., Mu J., Lu Y., Fan D., Liu Y., Guan J., Zhang Y., Yu S., Liu X., Zhang Y., Hong G., Han B., Choisne N., Demange N., Orjeda G., Samain S., Cattolico L., Pelletier E., Couloux A., Segurens B., Wincker P., D'Hont A., Scarpelli C., Weissenbach J., Salanoubat M., Quetier F., Yu Y., Kim H.R., Rambo T., Currie J., Collura K., Luo M., Yang T., Ammiraju J.S.S., Engler F., Soderlund C., Wing R.A., Palmer L.E., de la Bastide M., Spiegel L., Nascimento L., Zutavern T., O'Shaughnessy A., Dike S., Dedhia N., Preston R., Balija V., McCombie W.R., Chow T., Chen H., Chung M., Chen C., Shaw J., Wu H., Hsiao K., Chao Y., Chu M., Cheng C., Hour A., Lee P., Lin S., Lin Y., Liou J., Liu S., Hsing Y., Raghuvanshi S., Mohanty A., Bharti A.K., Gaur A., Gupta V., Kumar D., Ravi V., Vij S., Kapur A., Khurana P., Khurana P., Khurana J.P., Tyagi A.K., Gaikwad K., Singh A., Dalal V., Srivastava S., Dixit A., Pal A.K., Ghazi I.A., Yadav M., Pandit A., Bhargava A., Sureshbabu K., Batra K., Sharma T.R., Mohapatra T., Singh N.K., Messing J., Nelson A.B., Fuks G., Kavchok S., Keizer G., Linton E., Llaca V., Song R., Tanyolac B., Young S., Ho-Il K., Hahn J.H., Sangsakoo G., Vanavichit A., de Mattos Luiz.A.T., Zimmer P.D., Malone G., Dellagostin O., de Oliveira A.C., Bevan M., Bancroft I., Minx P., Cordum H., Wilson R., Cheng Z., Jin W., Jiang J., Leong S.A., Iwama H., Gojobori T., Itoh T., Niimura Y., Fujii Y., Habara T., Sakai H., Sato Y., Wilson G., Kumar K., McCouch S., Juretic N., Hoen D., Wright S., Bruskiewich R., Bureau T., Miyao A., Hirochika H., Nishikawa T., Kadowaki K., Sugiura M., Burr B., Sasaki T. Nature 436:793-800(2005) Cited for: NUCLEOTIDE SEQUENCE.
[5]	"Oryza sativa nipponbare(GA3) genomic DNA, chromosome 6." IRGSP(International Rice Genome Sequencing Project) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[6]	"The Second Rice Annotation Project Meeting (RAP2)." The Rice Annotation Project (RAP) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[7]	"The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information." Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K., Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K., Itoh T., Gojobori T., Sasaki T. Nucleic Acids Res. 34:D741-D744(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[8]	"Curated Genome Annotation of Oryza sativa ssp. japonica and Comparative Genome Analysis with Arabidopsis thaliana." The Rice Annotation Project (RAP) Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B., Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T., Burr F., Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B., Harada E. , Hiraki A.T., Hirochika H., Hoen D., Hokari H., Hosokawa S., Hsing Y., Ikawa H., Ikeo K., Imanishi T., Ito Y., Jaiswal P., Kanno M., Kawahara Y., Kawamura T., Kawashima H., Khurana J.P., Kikuchi S., Komatsu S., Koyanagi K.O., Kubooka H., Lieberherr D., Lin Y.C., Lonsdale D., Matsumoto T., Matsuya A., McCombie W.R., Messing J., Miyao A., Mulder N., Nagamura Y., Nam J., Namiki N., Numa H., Nurimoto S., O'donovan C., Ohyanagi H., Okido T., Oota S., Osato N., Palmer L.E., Quetier F., Raghuvanshi S., Saichi N., Sakai H., Sakai Y., Sakata K., Sakurai T., Sato F., Sato Y., Schoof H., Seki M., Shibata M., Shimizu Y., Shinozaki K., Shinso Y., Singh N.K., Smith-White B., Takeda J., Tanino M., Tatusova T., Thongjuea S., Todokoro F., Tsugane M., Tyagi A.K., Vanavichit A., Wang A., Wing R.A., Yamaguchi K., Yamamoto M., Yamamoto N., Yu Y., Zhang H., Zhao Q., Higo K., Burr B., Gojobori T., Sasaki T. Genome Res. 17:175-183(2007) Cited for: NUCLEOTIDE SEQUENCE.
[9]	"The rice annotation project database (RAP-DB): 2008 update." The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare.
[10]	"The Rice Annotation Project Database (RAP-DB): 2008 update." The Rice Annotation Project (RAP) Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y., Numa H., Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y., Habara T., Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H. , Matsuya A., Nakaoka H., Saichi N., Sanbonmatsu R., Sato Y., Shinso Y., Suzuki M., Takeda J., Tanino M., Todokoro F., Yamaguchi K., Yamamoto N., Yamasaki C., Imanishi T., Okido T., Tada M., Ikeo K., Tateno Y., Gojobori T., Lin Y.C., Wei F.J., Hsing Y.I., Zhao Q., Han B., Kramer M.R., McCombie R.W., Lonsdale D., O'Donovan C.C., Whitfield E.J., Apweiler R., Koyanagi K.O., Khurana J.P., Raghuvanshi S., Singh N.K., Tyagi A.K., Haberer G., Fujisawa M., Hosokawa S., Ito Y., Ikawa H., Shibata M., Yamamoto M., Bruskiewich R.M., Hoen D.R., Bureau TE., Namiki N., Ohyanagi H., Sakai Y., Nobushima S., Sakata K., Barrero R.A., Sato Y., Souvorov A., Smith-White B., Tatusova T., An S., An G., OOta S., Fuks G., Messing J., Christie K.R., Lieberherr D., Kim H., Zuccolo A., Wing R.A., Nobuta K., Green P.J., Lu C., Meyers BC., Chaparro C., Piegu B., Panaud O., Echeverria M. Nucleic Acids Res. 36:D1028-D1033(2008) Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP003044 Genomic DNA. Translation: BAD68028.1. AP005813 Genomic DNA. Translation: BAD69169.1. AP008212 Genomic DNA. Translation: BAF19293.1.
RefSeq	NP_001057379.1. NM_001063914.1.
UniGene	Os.44686.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	LOC_Os06g16390.1; LOC_Os06g16390.1; LOC_Os06g16390.
GeneID	4340748.
KEGG	osa:4340748.
Phylogenomic databases
KO	K11430.
OMA	KVIMVAG.
ProtClustDB	CLSN2683888.
Family and domain databases
InterPro	IPR026489. CXC_dom. IPR025778. Hist-Lys_N-MeTrfase_EZ. IPR001005. SANT/Myb. IPR001214. SET_dom. [Graphical view]
Pfam	PF00856. SET. 1 hit. [Graphical view]
SMART	SM00717. SANT. 1 hit. SM00317. SET. 1 hit. [Graphical view]
PROSITE	PS51633. CXC. 1 hit. PS51576. SAM_MT43_EZ. 1 hit. PS50280. SET. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5VN06_ORYSJ

Accession

Primary (citable) accession number: Q5VN06

Entry history

Integrated into UniProtKB/TrEMBL:	December 7, 2004
Last sequence update:	December 7, 2004
Last modified:	April 3, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)