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Unreviewed, UniProtKB/TrEMBL Q5V9X8 (Q5V9X8_HUMAN)

Last modified January 19, 2010. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Voltage-gated L-type calcium channel Cav1.2 alpha 1 subunit, splice variant 10* EMBL AAT67987.1
Gene names
Name: CACNA1C EMBL AAT67987.1
OrganismHomo sapiens (Human) EMBL AAT67987.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

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Protein attributes

Sequence length225 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level.

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Ontologies

Gene Ontology (GO)
   Biological processcalcium ion transport

Inferred from electronic annotation. Source: InterPro

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular functionvoltage-gated calcium channel activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAT67987.1
Non-terminal residue2251 EMBL AAT67987.1

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Sequences

Sequence LengthMass (Da)Tools
Q5V9X8-1 [UniParc].

Last modified December 7, 2004. Version 1.
Checksum: 79343CDC8E49B3F9

FASTA22525,897
        10         20         30         40         50         60 
MQDAMGYELP WVYFVSLVIF GSFFVLNLVL GVLSGEFSKE REKAKARGDF QKLREKQQLE 

        70         80         90        100        110        120 
EDLKGYLDWI TQAEDIDPEN EDEGMDEEKP RNMSMPTSET ESVNTENVAG GDIEGENCGA 

       130        140        150        160        170        180 
RLAKGSRSAV EPAVLLPWGV TTVNSPWPLE ELQTEALSQT SPSHRISKSK FSRYWRRWNR 

       190        200        210        220 
FCRRKCRAAV KSNVFYWLVI FLVFLNTLTI ASEHYNQPNW LTEVQ

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References

[1]"Transcript scanning reveals novel and extensive splice variations in human l-type voltage-gated calcium channel, Cav1.2 alpha1 subunit."
Tang Z.Z., Liang M.C., Lu S., Yu D., Yu C.Y., Yue D.T., Soong T.W.
J. Biol. Chem. 279:44335-44343(2004) [PubMed: 15299022] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY562396 mRNA. Translation: AAT67987.1.
IPIIPI00479852.
UniGeneHs.118262

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ5V9X8.

Genome annotation databases

UCSCuc009zdy.1. human.

Organism-specific databases

HGNCHGNC:1390. CACNA1C.
GenAtlasSearch...

Phylogenomic databases

HOVERGENQ5V9X8.

Family and domain databases

InterProIPR005451. VDCC_L_a1csu.
[Graphical view]
PANTHERPTHR10037:SF47. LVDCCAlpha1C. 1 hit.
ProtoNetSearch...

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Entry information

Entry nameQ5V9X8_HUMAN
AccessionPrimary (citable) accession number: Q5V9X8
Entry history
Integrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: January 19, 2010
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information