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Q5V5F5 (Q5V5F5_HALMA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length497 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5V5F5 [UniParc].

Last modified December 7, 2004. Version 1.
Checksum: 6C7E75B348ED77DF

FASTA49754,205
        10         20         30         40         50         60 
MASQHERTGP RARITESDRA GVDGVTLTDR IGLDAGEIRW RKEFTGFDGS DVDNLTAMAD 

        70         80         90        100        110        120 
ETNARAEAVV DDFYDHLQSF DETVEIFGRS TKSVDQLKNT QTQYLRDLVA GTYDKQYFEN 

       130        140        150        160        170        180 
RARIGKIHDM LDLGPKIYLG AYSIYFEHFL RTIVEDLQSG DAARDEALEE MQSRALSVFK 

       190        200        210        220        230        240 
LLNLDQQVAM DTYIDSYSQR LESAIDDQQT LMQEVESGLQ EPIDELSASA EEVAQTNKQI 

       250        260        270        280        290        300 
TMTAETQSES MDEVAGEVAD MSATIEEIAS TAEEVASTST SAEQKAERGN EAAQQAATMM 

       310        320        330        340        350        360 
NDVDDAVDTV STDIAGLREQ ADEIDDIVEV INDIADQTNM LALNASIEAA RAGEAGDGFA 

       370        380        390        400        410        420 
VVADEIKTLA GDSQEHANQI EDTVTEIQDE TVDAVESLET VTEQVTEGID QVETAAERLE 

       430        440        450        460        470        480 
EIVSAVNEAS QGIQEVSAAT DDQAASTEEV ASMVDELSSG IDDMSAQLDD LAATNERQTE 

       490 
KIQDVAETAR RLDTDTA 

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References

[1]"Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea."
Baliga N.S., Bonneau R., Facciotti M.T., Pan M., Glusman G., Deutsch E.W., Shannon P., Chiu Y., Weng R.S., Gan R.R., Hung P., Date S.V., Marcotte E., Hood L., Ng W.V.
Genome Res. 14:2221-2234(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY596297 Genomic DNA. Translation: AAV45247.1.
RefSeqYP_134953.1. NC_006396.1.

3D structure databases

ProteinModelPortalQ5V5F5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272569.rrnAC0183.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAV45247; AAV45247; rrnAC0183.
GeneID3129886.
KEGGhma:rrnAC0183.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000038449.
OMAQVAMDTY.
ProtClustDBCLSK296127.

Enzyme and pathway databases

BioCycHMAR272569:GJDH-166-MONOMER.

Family and domain databases

Gene3D1.10.490.10. 1 hit.
InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR009050. Globin-like.
IPR012292. Globin_dom.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 3 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF46458. SSF46458. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5V5F5_HALMA
AccessionPrimary (citable) accession number: Q5V5F5
Entry history
Integrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: February 19, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)