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Protein

Nascent polypeptide-associated complex protein

Gene

nac

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Contacts the emerging nascent chain on the ribosome.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Keywords - Ligandi

RNA-binding

Enzyme and pathway databases

BioCyciHMAR272569:GJDH-192-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Nascent polypeptide-associated complex proteinUniRule annotation
Gene namesi
Name:nacUniRule annotation
Ordered Locus Names:rrnAC0214
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 130130Nascent polypeptide-associated complex proteinPRO_0000135597Add
BLAST

Interactioni

Subunit structurei

Homodimer. Interacts with the ribosome. Binds ribosomal RNA.UniRule annotation

Protein-protein interaction databases

STRINGi272569.rrnAC0214.

Structurei

3D structure databases

ProteinModelPortaliQ5V5C9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 7468NAC-A/BUniRule annotationAdd
BLAST
Domaini92 – 13039UBAUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the NAC-alpha family.UniRule annotation
Contains 1 NAC-A/B (NAC-alpha/beta) domain.UniRule annotation
Contains 1 UBA domain.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04061. Archaea.
COG1308. LUCA.
HOGENOMiHOG000225886.
KOiK03626.
OMAiPRKMKQM.

Family and domain databases

HAMAPiMF_00814. NAC_arch.
InterProiIPR005231. NAC_arc.
IPR002715. Nas_poly-pep-assoc_cplx_dom.
[Graphical view]
PfamiPF01849. NAC. 1 hit.
[Graphical view]
SMARTiSM01407. NAC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00264. TIGR00264. 1 hit.
PROSITEiPS51151. NAC_AB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5V5C9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFGGGGGMNP RKMKQMMEQM GIDMEDIDAQ EVIIRTPDEE LVFDDAEVQL
60 70 80 90 100
MEAQGQKTYQ VVGEPESREL GSGEGSAAAE GDSDESDSSS GVDEDDVELV
110 120 130
AMRAGVDEDT AREALEANDG DLADAVDELE
Length:130
Mass (Da):13,908
Last modified:December 7, 2004 - v1
Checksum:iAE03CF97AFD9D439
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA. Translation: AAV45273.1.
RefSeqiWP_011222893.1. NC_006396.1.

Genome annotation databases

EnsemblBacteriaiAAV45273; AAV45273; rrnAC0214.
GeneIDi3129620.
KEGGihma:rrnAC0214.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA. Translation: AAV45273.1.
RefSeqiWP_011222893.1. NC_006396.1.

3D structure databases

ProteinModelPortaliQ5V5C9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272569.rrnAC0214.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV45273; AAV45273; rrnAC0214.
GeneIDi3129620.
KEGGihma:rrnAC0214.

Phylogenomic databases

eggNOGiarCOG04061. Archaea.
COG1308. LUCA.
HOGENOMiHOG000225886.
KOiK03626.
OMAiPRKMKQM.

Enzyme and pathway databases

BioCyciHMAR272569:GJDH-192-MONOMER.

Family and domain databases

HAMAPiMF_00814. NAC_arch.
InterProiIPR005231. NAC_arc.
IPR002715. Nas_poly-pep-assoc_cplx_dom.
[Graphical view]
PfamiPF01849. NAC. 1 hit.
[Graphical view]
SMARTiSM01407. NAC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00264. TIGR00264. 1 hit.
PROSITEiPS51151. NAC_AB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809.

Entry informationi

Entry nameiNAC_HALMA
AccessioniPrimary (citable) accession number: Q5V5C9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 25, 2005
Last sequence update: December 7, 2004
Last modified: May 11, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.