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Protein
Submitted name:

MCP domain signal transducer

Gene

htr8

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
MCP domain signal transducerImported
Gene namesi
Name:htr8Imported
Ordered Locus Names:rrnAC0976Imported
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)Imported
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei47 – 67HelicalSequence analysisAdd BLAST21
Transmembranei79 – 102HelicalSequence analysisAdd BLAST24
Transmembranei109 – 129HelicalSequence analysisAdd BLAST21
Transmembranei149 – 166HelicalSequence analysisAdd BLAST18
Transmembranei186 – 207HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi272569.rrnAC0976.

Structurei

3D structure databases

ProteinModelPortaliQ5V3F7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini266 – 320HAMPInterPro annotationAdd BLAST55
Domaini339 – 577Methyl-accepting transducerInterPro annotationAdd BLAST239

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili213 – 278Sequence analysisAdd BLAST66
Coiled coili485 – 509Sequence analysisAdd BLAST25

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiarCOG02320. Archaea.
COG0840. LUCA.
HOGENOMiHOG000038455.
OMAiWRGRHRN.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5V3F7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQPTGDIGQ QTDRNPGPVE RLESFVSYIP DGSTIPDKQW RNRHRSVVVV
60 70 80 90 100
TLLHIPFLFG LGIYTGSTPI AEAQIPATAL PRVLLLCGVV FALSAGSLIA
110 120 130 140 150
RFRRRVRTIL SVTAVFVSSL ALVQLSGGYI EAHFHFFVGM AMVAVYEDWV
160 170 180 190 200
PFLWGLAYVV LTHGYFGTID PSRVYNHAAA INNPWAWGLI HGGFVLMLCV
210 220 230 240 250
ALVNNWVSTE RSREKSQERF EQAEQRASEI DDLQAKQEEI ERKRAEAKEA
260 270 280 290 300
REKAEAKMQA AEQQNTELQE TASRFSEAMA AAADGDLTVR VDPDVADNEA
310 320 330 340 350
MAQIAESFNK MMTETESAME EIQTFSEEVA TTSDQVTAGA NEATGASEDM
360 370 380 390 400
SESIQGIASG ADEQREMLET VSDEMTDLSA TVEEVAASAE TVAERSRETA
410 420 430 440 450
EIADAGQETA QEAIAGSREV QTAIDSTVEN VERLDEKMAE IGDIVELIGD
460 470 480 490 500
IAEQTNMLAL NANIEAARAG NGSGGDGFAV VADEVKQLAE ETQTSASEIE
510 520 530 540 550
QLIAETQAQT ETTVTEARGA KEDMQESTEA VEAVVDTFTQ VAENAEATDN
560 570 580 590 600
GIQEISDTTD DQAATTEETV AMVEEAVDIS EATAAETETA SATAEEQAAS
610 620 630
MSQVSASIES LADQSERLQT MLSEFEVGSR
Length:630
Mass (Da):67,963
Last modified:December 7, 2004 - v1
Checksum:i7C87CFB372269061
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA. Translation: AAV45945.1.

Genome annotation databases

EnsemblBacteriaiAAV45945; AAV45945; rrnAC0976.
KEGGihma:rrnAC0976.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA. Translation: AAV45945.1.

3D structure databases

ProteinModelPortaliQ5V3F7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272569.rrnAC0976.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV45945; AAV45945; rrnAC0976.
KEGGihma:rrnAC0976.

Phylogenomic databases

eggNOGiarCOG02320. Archaea.
COG0840. LUCA.
HOGENOMiHOG000038455.
OMAiWRGRHRN.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5V3F7_HALMA
AccessioniPrimary (citable) accession number: Q5V3F7
Entry historyi
Integrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: November 2, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.